Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.89□□□□□ -1.47
PCNAP12004 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.89□□□□□ -1.47
PCNAP12004 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCNAP12004 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCNAP12004 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCNAP12004 OR9K1P-202ENST00000641111 3217 ntBASIC5.89□□□□□ -1.47
PCNAP12004 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.89□□□□□ -1.47
PCNAP12004 OR6K3-202ENST00000368146 996 ntBASIC5.89□□□□□ -1.47
PCNAP12004 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PCNAP12004 PEX12P1-201ENST00000400284 1048 ntBASIC5.89□□□□□ -1.47
PCNAP12004 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.89□□□□□ -1.47
PCNAP12004 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.89□□□□□ -1.47
PCNAP12004 RPL5P2-201ENST00000429598 854 ntBASIC5.89□□□□□ -1.47
PCNAP12004 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.89□□□□□ -1.47
PCNAP12004 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.89□□□□□ -1.47
PCNAP12004 MTND2P39-201ENST00000457230 764 ntBASIC5.89□□□□□ -1.47
PCNAP12004 AC124945.1-201ENST00000485133 188 ntBASIC5.89□□□□□ -1.47
PCNAP12004 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.89□□□□□ -1.47
PCNAP12004 AC105420.1-201ENST00000504389 582 ntBASIC5.89□□□□□ -1.47
PCNAP12004 AC113367.2-201ENST00000505749 160 ntBASIC5.89□□□□□ -1.47
PCNAP12004 AC090958.1-201ENST00000511122 351 ntBASIC5.89□□□□□ -1.47
PCNAP12004 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.89□□□□□ -1.47
PCNAP12004 AC097486.1-201ENST00000515331 210 ntBASIC5.89□□□□□ -1.47
PCNAP12004 RNA5SP441-201ENST00000516809 88 ntBASIC5.89□□□□□ -1.47
PCNAP12004 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.89□□□□□ -1.47
PCNAP12004 TPM3P3-201ENST00000521343 354 ntBASIC5.89□□□□□ -1.47
PCNAP12004 OR6M2P-201ENST00000529831 871 ntBASIC5.89□□□□□ -1.47
PCNAP12004 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.89□□□□□ -1.47
PCNAP12004 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.89□□□□□ -1.47
PCNAP12004 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCNAP12004 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.89□□□□□ -1.47
PCNAP12004 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.89□□□□□ -1.47
PCNAP12004 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.89□□□□□ -1.47
PCNAP12004 AC010487.1-201ENST00000594408 1172 ntBASIC5.89□□□□□ -1.47
PCNAP12004 AC004890.3-201ENST00000605566 1095 ntBASIC5.89□□□□□ -1.47
PCNAP12004 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.89□□□□□ -1.47
PCNAP12004 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCNAP12004 AC069234.4-201ENST00000621276 412 ntBASIC5.89□□□□□ -1.47
PCNAP12004 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCNAP12004 AL121839.2-201ENST00000565058 6943 ntBASIC5.89□□□□□ -1.47
PCNAP12004 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCNAP12004 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCNAP12004 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
PCNAP12004 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCNAP12004 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.89□□□□□ -1.47
PCNAP12004 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.89□□□□□ -1.47
PCNAP12004 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCNAP12004 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCNAP12004 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCNAP12004 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.89□□□□□ -1.47
PCNAP12004 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCNAP12004 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCNAP12004 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.88□□□□□ -1.47
PCNAP12004 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCNAP12004 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.88□□□□□ -1.47
PCNAP12004 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.88□□□□□ -1.47
PCNAP12004 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PCNAP12004 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCNAP12004 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCNAP12004 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCNAP12004 MIR133A2-201ENST00000347538 102 ntBASIC5.88□□□□□ -1.47
PCNAP12004 MIR188-201ENST00000385034 86 ntBASIC5.88□□□□□ -1.47
PCNAP12004 AL139805.1-201ENST00000407837 289 ntBASIC5.88□□□□□ -1.47
PCNAP12004 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.88□□□□□ -1.47
PCNAP12004 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.88□□□□□ -1.47
PCNAP12004 AC015977.1-201ENST00000418887 292 ntBASIC5.88□□□□□ -1.47
PCNAP12004 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.88□□□□□ -1.47
PCNAP12004 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.88□□□□□ -1.47
PCNAP12004 AL354707.3-201ENST00000427308 331 ntBASIC5.88□□□□□ -1.47
PCNAP12004 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.88□□□□□ -1.47
PCNAP12004 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.88□□□□□ -1.47
PCNAP12004 RPL17P35-201ENST00000432217 549 ntBASIC5.88□□□□□ -1.47
PCNAP12004 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.88□□□□□ -1.47
PCNAP12004 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.88□□□□□ -1.47
PCNAP12004 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.88□□□□□ -1.47
PCNAP12004 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.88□□□□□ -1.47
PCNAP12004 EIF4E2P2-201ENST00000492033 736 ntBASIC5.88□□□□□ -1.47
PCNAP12004 AP002453.1-201ENST00000492327 668 ntBASIC5.88□□□□□ -1.47
PCNAP12004 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.88□□□□□ -1.47
PCNAP12004 AC008945.1-201ENST00000505144 499 ntBASIC5.88□□□□□ -1.47
PCNAP12004 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.88□□□□□ -1.47
PCNAP12004 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.88□□□□□ -1.47
PCNAP12004 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.88□□□□□ -1.47
PCNAP12004 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.88□□□□□ -1.47
PCNAP12004 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.88□□□□□ -1.47
PCNAP12004 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
PCNAP12004 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.88□□□□□ -1.47
PCNAP12004 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.88□□□□□ -1.47
PCNAP12004 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PCNAP12004 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.88□□□□□ -1.47
PCNAP12004 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.88□□□□□ -1.47
PCNAP12004 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.88□□□□□ -1.47
PCNAP12004 AP005136.2-201ENST00000583253 1049 ntBASIC5.88□□□□□ -1.47
PCNAP12004 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.88□□□□□ -1.47
PCNAP12004 AC005828.7-201ENST00000607331 556 ntBASIC5.88□□□□□ -1.47
PCNAP12004 AC080188.3-201ENST00000624842 748 ntBASIC5.88□□□□□ -1.47
PCNAP12004 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.88□□□□□ -1.47
PCNAP12004 AC119674.1-220ENST00000641502 1048 ntBASIC5.88□□□□□ -1.47
PCNAP12004 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCNAP12004 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms