Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 OR11H2-202ENST00000641517 1085 ntBASIC4.59□□□□□ -1.67
CD28P10747 IARS-213ENST00000627121 4587 ntTSL 5 BASIC4.59□□□□□ -1.68
CD28P10747 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
CD28P10747 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
CD28P10747 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CD28P10747 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CD28P10747 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CD28P10747 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CD28P10747 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.58□□□□□ -1.68
CD28P10747 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CD28P10747 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CD28P10747 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CD28P10747 TTC41P-205ENST00000551270 3963 ntBASIC4.58□□□□□ -1.68
CD28P10747 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CD28P10747 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.58□□□□□ -1.68
CD28P10747 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.58□□□□□ -1.68
CD28P10747 CYP2AC1P-201ENST00000407830 1173 ntBASIC4.58□□□□□ -1.68
CD28P10747 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.58□□□□□ -1.68
CD28P10747 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.58□□□□□ -1.68
CD28P10747 AL662874.1-201ENST00000426065 230 ntBASIC4.58□□□□□ -1.68
CD28P10747 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CD28P10747 SDC4P-201ENST00000453285 601 ntBASIC4.58□□□□□ -1.68
CD28P10747 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.58□□□□□ -1.68
CD28P10747 AL022319.1-201ENST00000458183 1167 ntBASIC4.58□□□□□ -1.68
CD28P10747 ACA64.4-201ENST00000459070 127 ntBASIC4.58□□□□□ -1.68
CD28P10747 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC4.58□□□□□ -1.68
CD28P10747 RPS26P39-201ENST00000469206 341 ntBASIC4.58□□□□□ -1.68
CD28P10747 AC128716.1-201ENST00000475129 166 ntBASIC4.58□□□□□ -1.68
CD28P10747 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC4.58□□□□□ -1.68
CD28P10747 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.58□□□□□ -1.68
CD28P10747 SNORA43.3-201ENST00000517240 103 ntBASIC4.58□□□□□ -1.68
CD28P10747 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.58□□□□□ -1.68
CD28P10747 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.58□□□□□ -1.68
CD28P10747 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.58□□□□□ -1.68
CD28P10747 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CD28P10747 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.58□□□□□ -1.68
CD28P10747 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CD28P10747 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.58□□□□□ -1.68
CD28P10747 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.58□□□□□ -1.68
CD28P10747 FO393422.1-201ENST00000603908 708 ntBASIC4.58□□□□□ -1.68
CD28P10747 AC104695.2-201ENST00000605056 775 ntBASIC4.58□□□□□ -1.68
CD28P10747 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.58□□□□□ -1.68
CD28P10747 RN7SL544P-201ENST00000617232 284 ntBASIC4.58□□□□□ -1.68
CD28P10747 RN7SL763P-201ENST00000620922 284 ntBASIC4.58□□□□□ -1.68
CD28P10747 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.58□□□□□ -1.68
CD28P10747 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CD28P10747 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.58□□□□□ -1.68
CD28P10747 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.58□□□□□ -1.68
CD28P10747 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.58□□□□□ -1.68
CD28P10747 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.58□□□□□ -1.68
CD28P10747 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CD28P10747 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC4.58□□□□□ -1.68
CD28P10747 AL137058.3-201ENST00000624531 3099 ntBASIC4.58□□□□□ -1.68
CD28P10747 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CD28P10747 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
CD28P10747 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CD28P10747 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CD28P10747 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CD28P10747 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CD28P10747 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD28P10747 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD28P10747 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CD28P10747 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD28P10747 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD28P10747 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CD28P10747 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CD28P10747 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD28P10747 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD28P10747 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CD28P10747 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD28P10747 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD28P10747 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD28P10747 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CD28P10747 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.57□□□□□ -1.68
CD28P10747 RNA5SP46-201ENST00000362370 120 ntBASIC4.57□□□□□ -1.68
CD28P10747 MIR143-201ENST00000385300 106 ntBASIC4.57□□□□□ -1.68
CD28P10747 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD28P10747 AL391361.1-201ENST00000405580 489 ntBASIC4.57□□□□□ -1.68
CD28P10747 OR3A2-201ENST00000408891 1076 ntBASIC4.57□□□□□ -1.68
CD28P10747 TMA16P2-201ENST00000413187 601 ntBASIC4.57□□□□□ -1.68
CD28P10747 HMGA1P8-201ENST00000414130 321 ntBASIC4.57□□□□□ -1.68
CD28P10747 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.57□□□□□ -1.68
CD28P10747 AC007562.1-201ENST00000421819 517 ntBASIC4.57□□□□□ -1.68
CD28P10747 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC4.57□□□□□ -1.68
CD28P10747 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.57□□□□□ -1.68
CD28P10747 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.57□□□□□ -1.68
CD28P10747 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CD28P10747 DEFA9P-201ENST00000433042 285 ntBASIC4.57□□□□□ -1.68
CD28P10747 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.57□□□□□ -1.68
CD28P10747 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.57□□□□□ -1.68
CD28P10747 AC023274.2-201ENST00000445264 521 ntBASIC4.57□□□□□ -1.68
CD28P10747 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.57□□□□□ -1.68
CD28P10747 LRRC37A14P-201ENST00000452297 462 ntBASIC4.57□□□□□ -1.68
CD28P10747 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC4.57□□□□□ -1.68
CD28P10747 RN7SL466P-201ENST00000497546 295 ntBASIC4.57□□□□□ -1.68
CD28P10747 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.57□□□□□ -1.68
CD28P10747 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.57□□□□□ -1.68
CD28P10747 AC074087.1-201ENST00000512059 724 ntBASIC4.57□□□□□ -1.68
CD28P10747 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.57□□□□□ -1.68
CD28P10747 DPPA3P2-202ENST00000557188 1219 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms