Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHISA3A0PJX4 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHISA3A0PJX4 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHISA3A0PJX4 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SHISA3A0PJX4 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHISA3A0PJX4 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SHISA3A0PJX4 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHISA3A0PJX4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.33□□□□□ -1.4
SHISA3A0PJX4 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHISA3A0PJX4 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.33□□□□□ -1.4
SHISA3A0PJX4 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.33□□□□□ -1.4
SHISA3A0PJX4 TATDN2P3-201ENST00000452855 3665 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AC093297.3-201ENST00000607056 2517 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AC087045.3-201ENST00000623046 2468 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 FGF7P2-201ENST00000332473 296 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 TAC1-203ENST00000350485 975 ntTSL 5 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 RNU6-543P-201ENST00000362576 108 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 BTF3P7-201ENST00000407097 488 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 SNORA2C-201ENST00000408564 137 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 GAPDHP73-201ENST00000423411 1007 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 HSPE1P16-201ENST00000426640 348 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 MTCO1P54-201ENST00000430139 712 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 MTND3P21-201ENST00000433774 331 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 HMGN1P6-201ENST00000438508 291 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 ELOCP10-201ENST00000440624 327 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AC011742.2-201ENST00000443818 352 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 EEF1E1P1-201ENST00000446998 430 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AC003071.1-201ENST00000451219 789 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 RN7SL233P-201ENST00000469988 277 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AC117395.1-201ENST00000487390 403 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 RN7SL635P-201ENST00000492123 296 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AC091874.2-201ENST00000505889 720 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AC025881.1-201ENST00000518851 512 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AP003033.2-201ENST00000528901 805 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 OR7E96P-201ENST00000530816 976 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 NTS-203ENST00000551529 801 ntTSL 3 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AC119501.1-201ENST00000603646 475 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 ELOCP34-201ENST00000604436 327 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AL355333.1-201ENST00000605632 279 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AC106028.5-201ENST00000610332 395 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 AL356321.1-201ENST00000621360 228 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 OR5AK4P-201ENST00000635912 903 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 CASC19-264ENST00000641912 1184 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.32□□□□□ -1.4
SHISA3A0PJX4 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHISA3A0PJX4 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHISA3A0PJX4 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHISA3A0PJX4 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.31□□□□□ -1.4
SHISA3A0PJX4 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHISA3A0PJX4 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHISA3A0PJX4 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHISA3A0PJX4 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms