Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AC068860.1-201ENST00000623701 3736 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 THAP12P1-201ENST00000398672 2203 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 RNA5SP71-201ENST00000362967 126 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 Y_RNA.296-201ENST00000364930 108 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AL121878.1-201ENST00000418638 859 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 USP9YP20-201ENST00000419224 558 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC00993-201ENST00000420453 540 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 DPY19L1P2-201ENST00000426647 915 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 RANP5-201ENST00000427731 655 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 EIF3IP1-201ENST00000433048 967 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 RPL21P110-201ENST00000433345 446 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC01865-202ENST00000436808 853 ntTSL 5 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 OR7E125P-201ENST00000443450 846 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AC104306.1-201ENST00000449702 371 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AC093799.1-201ENST00000452411 499 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 PPIAP28-201ENST00000458378 485 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 RN7SL201P-201ENST00000482306 296 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 RN7SL239P-201ENST00000490061 300 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 MTCYBP43-201ENST00000513621 740 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 NTAN1P2-201ENST00000515730 940 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AP003174.3-201ENST00000537926 516 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AC023080.1-201ENST00000551663 931 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AC092868.1-201ENST00000557949 802 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AC142086.3-201ENST00000563896 802 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AC008536.2-201ENST00000607284 349 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AC108479.2-201ENST00000617314 601 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 MIR6863-201ENST00000636112 90 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 TMEM75-201ENST00000624314 2165 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AC130464.1-201ENST00000416201 1500 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 DCAF13P1-201ENST00000495256 1330 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 AL162171.3-201ENST00000617439 3178 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 GTF2IP1-202ENST00000614592 2047 ntBASIC7.51□□□□□ -1.21
PCDHGA11Q9Y5H2 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 THAP12P7-201ENST00000520248 2290 ntBASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
PCDHGA11Q9Y5H2 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms