Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 MAPK10-301ENST00000641313 2482 ntBASIC9.46□□□□□ -0.89
PCDHB13Q9Y5F0 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC9.46□□□□□ -0.89
PCDHB13Q9Y5F0 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
PCDHB13Q9Y5F0 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PCDHB13Q9Y5F0 CALD1-201ENST00000361675 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PCDHB13Q9Y5F0 MEST-203ENST00000378576 2180 ntTSL 5 BASIC9.46□□□□□ -0.89
PCDHB13Q9Y5F0 AC016582.1-201ENST00000592640 1716 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
PCDHB13Q9Y5F0 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
PCDHB13Q9Y5F0 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PCDHB13Q9Y5F0 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PCDHB13Q9Y5F0 RN7SKP72-201ENST00000362327 292 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 RNU6-492P-201ENST00000363035 104 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 RNA5SP141-201ENST00000364543 120 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 RPL23AP32-201ENST00000395315 459 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 MRPL42P2-201ENST00000403169 426 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 RNU2-9P-201ENST00000410194 145 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 RNA5SP221-201ENST00000411271 103 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 OR13D3P-201ENST00000412501 937 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 RBMY2KP-201ENST00000418221 992 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 RPL31P12-201ENST00000422587 358 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 RPL34P6-201ENST00000432390 345 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 AC023347.2-201ENST00000433994 462 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 AC104772.1-201ENST00000444764 862 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 PCNPP5-201ENST00000452246 481 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 RPL5P30-201ENST00000465511 891 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 AC092324.1-201ENST00000468671 324 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 TMEM248P1-201ENST00000510579 951 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 AC018797.3-201ENST00000513388 1241 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 RNY3P15-201ENST00000516297 97 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 POLR2KP1-201ENST00000553226 168 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 UBE2CP4-201ENST00000561405 535 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 RN7SL353P-201ENST00000579902 252 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 RN7SL246P-201ENST00000584467 296 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 LGALS17A-205ENST00000598736 1111 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 BCRP9-201ENST00000605312 388 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 GNAS-AS1_5.1-201ENST00000614281 121 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 AC007326.3-201ENST00000636418 176 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 AC105101.1-201ENST00000623698 2873 ntTSL 5 BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 INPP5B-205ENST00000373027 3905 ntTSL 2 BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 PPBPP2-201ENST00000513150 1362 ntBASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 CLIP1-214ENST00000540539 2592 ntTSL 2 BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC9.46□□□□□ -0.9
PCDHB13Q9Y5F0 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 ADGRF1-201ENST00000283297 2142 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 Y_RNA.153-201ENST00000363615 91 ntBASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 MIR146B-201ENST00000365699 73 ntBASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 AL136380.2-201ENST00000411837 492 ntBASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 AC127526.1-201ENST00000417526 366 ntBASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 COX6CP17-201ENST00000421389 185 ntBASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 AC018865.2-201ENST00000423631 129 ntBASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 AL158073.1-201ENST00000426848 1104 ntBASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 ATP6V1E1P1-201ENST00000439215 681 ntBASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 AC107399.1-201ENST00000451226 265 ntBASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 ALG13-214ENST00000482742 620 ntTSL 2 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 GZMAP1-201ENST00000503054 631 ntBASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 RPL10P9-201ENST00000522551 645 ntBASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 AP000916.2-201ENST00000528904 286 ntBASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 AC233702.11-201ENST00000598588 333 ntBASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 Metazoa_SRP.71-201ENST00000612122 282 ntBASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 Metazoa_SRP.165-201ENST00000615681 260 ntBASIC9.45□□□□□ -0.9
PCDHB13Q9Y5F0 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms