Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AC003989.1-201ENST00000434569 565 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC096632.2-201ENST00000438139 1239 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 NPM1P23-201ENST00000440193 849 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 RPL12P49-201ENST00000441100 121 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC079922.1-201ENST00000443291 359 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AL031681.1-201ENST00000443304 400 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 RPS18P1-201ENST00000447840 458 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 MTND1P29-201ENST00000448112 647 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC112492.1-201ENST00000449607 712 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 snoU13.29-201ENST00000459370 104 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC004890.1-201ENST00000461005 181 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC010468.1-201ENST00000461022 817 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC005165.2-201ENST00000466070 380 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 RN7SL83P-201ENST00000468131 297 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 RPL5P12-201ENST00000477071 851 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC044810.1-201ENST00000480271 711 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC114728.1-201ENST00000488289 483 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 Y_RNA.655-201ENST00000515919 96 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AP003355.1-201ENST00000518956 587 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC090666.1-201ENST00000578241 445 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 MIR3189-201ENST00000578735 73 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 PCNAP1-202ENST00000595299 752 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC010620.1-201ENST00000601088 1102 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 RPP40P2-201ENST00000603596 712 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AL365400.2-201ENST00000605604 902 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AL390877.1-201ENST00000605704 214 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AL008723.3-201ENST00000608926 449 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AC013562.2-201ENST00000611632 603 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 CYCSP41-201ENST00000616920 296 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 MIR6503-201ENST00000622884 86 ntBASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PACSIN3Q9UKS6 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 ABCA11P-202ENST00000504019 2110 ntBASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 RNU4-39P-201ENST00000362455 127 ntBASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 RNU6-386P-201ENST00000362650 107 ntBASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 RPL23AP17-201ENST00000401064 499 ntBASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 AL590635.1-201ENST00000406314 586 ntBASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 RNA5SP155-201ENST00000411154 129 ntBASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 AC009518.2-201ENST00000418056 731 ntBASIC6.07□□□□□ -1.44
PACSIN3Q9UKS6 AL596268.1-201ENST00000427910 1048 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms