Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LRFN1Q9P244 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
LRFN1Q9P244 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LRFN1Q9P244 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LRFN1Q9P244 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LRFN1Q9P244 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LRFN1Q9P244 RN7SKP281-201ENST00000410472 352 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 XKRYP4-201ENST00000414395 483 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 AL158825.1-201ENST00000414735 521 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 MRPL50P1-201ENST00000431951 384 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 PSMD10P2-201ENST00000432890 672 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 LDHAP2-201ENST00000437325 985 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 RNF2P1-201ENST00000442955 1010 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 RPS27P5-201ENST00000444247 244 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 XKRYP5-201ENST00000449659 483 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 AC091874.2-201ENST00000505889 720 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 AC112518.2-201ENST00000508565 425 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 HSD3BP3-201ENST00000514706 994 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 MTATP6P9-201ENST00000515039 680 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 SNORA81.2-201ENST00000516868 170 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 IGHV3-57-201ENST00000520143 280 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LRFN1Q9P244 AL845552.1-201ENST00000556820 323 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 AC104229.1-201ENST00000561364 255 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 MIR4502-201ENST00000580432 81 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 SNORA74.4-201ENST00000607595 199 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LRFN1Q9P244 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 AC005156.1-201ENST00000613371 573 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 RN7SL261P-201ENST00000613441 282 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 MRPL57P1-201ENST00000621486 265 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 AC012653.2-201ENST00000621880 420 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 AC021106.3-201ENST00000623925 531 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LRFN1Q9P244 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LRFN1Q9P244 SAGE3P-201ENST00000619800 1635 ntBASIC5.92□□□□□ -1.46
LRFN1Q9P244 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
LRFN1Q9P244 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.92□□□□□ -1.46
LRFN1Q9P244 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
LRFN1Q9P244 IFIT1P1-201ENST00000400497 1449 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 AC125238.2-201ENST00000430003 1440 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LRFN1Q9P244 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LRFN1Q9P244 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LRFN1Q9P244 HSPA8P19-201ENST00000505359 1517 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 VPS35P1-201ENST00000563400 1518 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LRFN1Q9P244 AL359976.1-201ENST00000418655 3528 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 RNA5SP188-201ENST00000362916 129 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 DHFRP2-201ENST00000414224 547 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 NME1P1-201ENST00000420914 382 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 MTND2P9-201ENST00000422293 931 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 AL354692.1-201ENST00000423044 315 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.91□□□□□ -1.46
LRFN1Q9P244 CXCR2P1-202ENST00000443392 1074 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 POU5F1P5-201ENST00000445059 658 ntBASIC5.91□□□□□ -1.46
LRFN1Q9P244 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms