Protein–RNA interactions for Protein: Q9P1A2

PPP4R1L, Putative serine/threonine-protein phosphatase 4 regulatory subunit 1-like, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1LQ9P1A2 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
PPP4R1LQ9P1A2 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AL353625.1-202ENST00000366273 571 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 RNA5SP474-201ENST00000391234 90 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 RNU4-64P-201ENST00000410795 131 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AHCYP8-201ENST00000425108 209 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AL353572.1-201ENST00000442490 417 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 SNRPBP1-201ENST00000443634 282 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 RPL23AP28-201ENST00000448062 470 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC009961.3-201ENST00000449832 765 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 OR52Y1P-201ENST00000452418 828 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 RN7SKP198-201ENST00000459286 306 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 RN7SL372P-201ENST00000461982 298 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC011037.1-201ENST00000483964 558 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 TPT1P3-201ENST00000492841 512 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 FTH1P8-201ENST00000498161 514 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 RN7SL104P-201ENST00000498686 293 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 FABP5P12-201ENST00000515543 389 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC140063.1-201ENST00000541343 259 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC135628.1-201ENST00000568867 534 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AL035411.2-201ENST00000604022 421 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC109347.2-201ENST00000610220 349 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC009163.6-201ENST00000612367 342 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC116165.3-201ENST00000614524 400 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC131009.3-201ENST00000621809 287 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 Z69908.1-201ENST00000622603 247 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 AC011503.2-201ENST00000594230 1500 ntBASIC6.2□□□□□ -1.42
PPP4R1LQ9P1A2 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 AC004023.1-201ENST00000561473 1744 ntBASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 RNA5SP382-201ENST00000363355 112 ntBASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 RNU1-55P-201ENST00000365510 158 ntBASIC6.19□□□□□ -1.42
PPP4R1LQ9P1A2 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 194.5 ms