Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 AC240504.1-201ENST00000395709 845 ntBASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 AC013470.3-201ENST00000420252 1194 ntBASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 AC245884.2-201ENST00000426257 404 ntBASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 TUBB4BP6-201ENST00000437576 479 ntBASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 BUD31P2-201ENST00000449374 300 ntBASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 RN7SL165P-201ENST00000477476 291 ntBASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 RPL17P2-201ENST00000491913 451 ntBASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 MIR6778-201ENST00000617912 73 ntBASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 AC024884.1-201ENST00000620583 399 ntBASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 AC004836.1-201ENST00000623032 634 ntBASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 AC073488.3-201ENST00000631611 778 ntBASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.87□□□□□ -1.15
CHMP4AQ9BY43 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 HDAC1P2-201ENST00000453661 1398 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 AP001541.1-201ENST00000623322 1904 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 EIF3EP1-201ENST00000433978 1316 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 LCN1P2-201ENST00000372030 223 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 AL132875.1-201ENST00000403623 949 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 RPS15AP30-201ENST00000420976 390 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 FTLP8-201ENST00000446770 267 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 AC022431.1-201ENST00000450941 438 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 RN7SL352P-201ENST00000466002 277 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 ATG10-AS1-201ENST00000504846 648 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 IGKV3D-25-201ENST00000519599 235 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 AC092865.1-201ENST00000544395 1023 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 CYCSP38-201ENST00000559840 322 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 AL136131.3-201ENST00000607600 188 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 AC004801.6-201ENST00000616571 978 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 RFPL4AP6-201ENST00000616792 846 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 AL031658.2-201ENST00000616850 651 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 RMST_5.1-201ENST00000618704 126 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 AL133370.2-201ENST00000619934 439 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 OR7A1P-202ENST00000641542 1158 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 SAMMSON-213ENST00000641336 1521 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 AL161756.3-201ENST00000641216 2071 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 GNL2P1-201ENST00000451274 2190 ntBASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4AQ9BY43 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 UGT2B26P-201ENST00000508672 1613 ntBASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 AC005332.5-201ENST00000591222 2919 ntBASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms