Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AP000346.3-201ENST00000622821 210 ntBASIC7.37□□□□□ -1.23
ABCA3Q99758 AC112694.2-201ENST00000623697 768 ntBASIC7.37□□□□□ -1.23
ABCA3Q99758 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
ABCA3Q99758 AC018765.1-201ENST00000623357 3446 ntBASIC7.37□□□□□ -1.23
ABCA3Q99758 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC7.37□□□□□ -1.23
ABCA3Q99758 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ABCA3Q99758 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
ABCA3Q99758 EPS15P1-202ENST00000459691 2071 ntBASIC7.37□□□□□ -1.23
ABCA3Q99758 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
ABCA3Q99758 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ABCA3Q99758 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ABCA3Q99758 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.37□□□□□ -1.23
ABCA3Q99758 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.36□□□□□ -1.23
ABCA3Q99758 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ABCA3Q99758 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ABCA3Q99758 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ABCA3Q99758 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
ABCA3Q99758 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC7.36□□□□□ -1.23
ABCA3Q99758 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
ABCA3Q99758 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.36□□□□□ -1.23
ABCA3Q99758 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
ABCA3Q99758 RNA5SP91-201ENST00000390902 119 ntBASIC7.36□□□□□ -1.23
ABCA3Q99758 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ABCA3Q99758 AL138878.2-201ENST00000440581 1241 ntBASIC7.36□□□□□ -1.23
ABCA3Q99758 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.36□□□□□ -1.23
ABCA3Q99758 GAPDHP25-201ENST00000447061 1001 ntBASIC7.36□□□□□ -1.23
ABCA3Q99758 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ABCA3Q99758 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.36□□□□□ -1.23
ABCA3Q99758 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.36□□□□□ -1.23
ABCA3Q99758 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
ABCA3Q99758 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
ABCA3Q99758 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC7.36□□□□□ -1.23
ABCA3Q99758 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.36□□□□□ -1.23
ABCA3Q99758 AC114876.1-201ENST00000490962 1366 ntBASIC7.36□□□□□ -1.23
ABCA3Q99758 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
ABCA3Q99758 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.36□□□□□ -1.23
ABCA3Q99758 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
ABCA3Q99758 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ABCA3Q99758 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.36□□□□□ -1.23
ABCA3Q99758 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.36□□□□□ -1.23
ABCA3Q99758 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ABCA3Q99758 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.36□□□□□ -1.23
ABCA3Q99758 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
ABCA3Q99758 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ABCA3Q99758 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ABCA3Q99758 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC7.35□□□□□ -1.23
ABCA3Q99758 AL133482.1-201ENST00000415988 498 ntBASIC7.35□□□□□ -1.23
ABCA3Q99758 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC7.35□□□□□ -1.23
ABCA3Q99758 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC7.35□□□□□ -1.23
ABCA3Q99758 AC002075.1-201ENST00000457396 676 ntBASIC7.35□□□□□ -1.23
ABCA3Q99758 TRBV5-2-201ENST00000489095 273 ntBASIC7.35□□□□□ -1.23
ABCA3Q99758 RPS17P5-201ENST00000498293 408 ntBASIC7.35□□□□□ -1.23
ABCA3Q99758 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.35□□□□□ -1.23
ABCA3Q99758 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC7.35□□□□□ -1.23
ABCA3Q99758 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC7.35□□□□□ -1.23
ABCA3Q99758 AC091193.1-201ENST00000604640 448 ntBASIC7.35□□□□□ -1.23
ABCA3Q99758 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC7.35□□□□□ -1.23
ABCA3Q99758 CASC19-221ENST00000641309 1382 ntBASIC7.35□□□□□ -1.23
ABCA3Q99758 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.35□□□□□ -1.23
ABCA3Q99758 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.35□□□□□ -1.23
ABCA3Q99758 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
ABCA3Q99758 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.35□□□□□ -1.23
ABCA3Q99758 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.35□□□□□ -1.23
ABCA3Q99758 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.35□□□□□ -1.23
ABCA3Q99758 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
ABCA3Q99758 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 RN7SKP149-201ENST00000363008 344 ntBASIC7.35□□□□□ -1.23
ABCA3Q99758 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 AC007568.1-201ENST00000422912 471 ntBASIC7.35□□□□□ -1.23
ABCA3Q99758 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC7.35□□□□□ -1.23
ABCA3Q99758 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC7.35□□□□□ -1.23
ABCA3Q99758 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC7.35□□□□□ -1.23
ABCA3Q99758 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC7.35□□□□□ -1.23
ABCA3Q99758 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC7.35□□□□□ -1.23
ABCA3Q99758 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.35□□□□□ -1.23
ABCA3Q99758 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC7.35□□□□□ -1.23
ABCA3Q99758 KRTAP5-14P-201ENST00000502328 121 ntBASIC7.35□□□□□ -1.23
ABCA3Q99758 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC7.35□□□□□ -1.23
ABCA3Q99758 AC093799.2-201ENST00000610062 578 ntBASIC7.35□□□□□ -1.23
ABCA3Q99758 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
ABCA3Q99758 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ABCA3Q99758 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
ABCA3Q99758 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms