Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 AL513533.1-201ENST00000453728 415 ntBASIC9.28□□□□□ -0.92
IFT140Q96RY7 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
IFT140Q96RY7 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
IFT140Q96RY7 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
IFT140Q96RY7 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 AL034546.1-201ENST00000623740 3693 ntBASIC9.28□□□□□ -0.92
IFT140Q96RY7 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
IFT140Q96RY7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
IFT140Q96RY7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
IFT140Q96RY7 AL133388.1-201ENST00000404509 287 ntBASIC9.28□□□□□ -0.92
IFT140Q96RY7 RNA5SP487-201ENST00000410186 122 ntBASIC9.28□□□□□ -0.92
IFT140Q96RY7 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 AC068587.1-201ENST00000483613 781 ntBASIC9.28□□□□□ -0.92
IFT140Q96RY7 DUTP1-201ENST00000493631 470 ntBASIC9.28□□□□□ -0.92
IFT140Q96RY7 DUBR-205ENST00000495228 411 ntTSL 2 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 AC018809.2-201ENST00000602436 3823 ntBASIC9.28□□□□□ -0.92
IFT140Q96RY7 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
IFT140Q96RY7 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
IFT140Q96RY7 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC9.27□□□□□ -0.92
IFT140Q96RY7 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC9.27□□□□□ -0.92
IFT140Q96RY7 AL391261.1-201ENST00000555712 1479 ntBASIC9.27□□□□□ -0.93
IFT140Q96RY7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC9.27□□□□□ -0.93
IFT140Q96RY7 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
IFT140Q96RY7 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
IFT140Q96RY7 AL034549.2-201ENST00000618285 3373 ntBASIC9.27□□□□□ -0.93
IFT140Q96RY7 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
IFT140Q96RY7 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
IFT140Q96RY7 AC008957.3-201ENST00000624112 2242 ntBASIC9.27□□□□□ -0.93
IFT140Q96RY7 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
IFT140Q96RY7 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
IFT140Q96RY7 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
IFT140Q96RY7 RNU1-24P-201ENST00000364285 165 ntBASIC9.27□□□□□ -0.93
IFT140Q96RY7 AC211486.3-201ENST00000412694 621 ntBASIC9.27□□□□□ -0.93
IFT140Q96RY7 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC9.27□□□□□ -0.93
IFT140Q96RY7 RNU1-88P-201ENST00000459274 128 ntBASIC9.27□□□□□ -0.93
IFT140Q96RY7 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC9.27□□□□□ -0.93
IFT140Q96RY7 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC9.27□□□□□ -0.93
IFT140Q96RY7 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC9.27□□□□□ -0.93
IFT140Q96RY7 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC9.27□□□□□ -0.93
IFT140Q96RY7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC9.27□□□□□ -0.93
IFT140Q96RY7 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC9.27□□□□□ -0.93
IFT140Q96RY7 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC9.27□□□□□ -0.93
IFT140Q96RY7 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
IFT140Q96RY7 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC9.26□□□□□ -0.93
IFT140Q96RY7 COL6A4P1-202ENST00000487147 4317 ntBASIC9.26□□□□□ -0.93
IFT140Q96RY7 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
IFT140Q96RY7 MAPK10-323ENST00000641493 3207 ntBASIC9.26□□□□□ -0.93
IFT140Q96RY7 AC006213.6-201ENST00000623722 4179 ntBASIC9.26□□□□□ -0.93
IFT140Q96RY7 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
IFT140Q96RY7 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
IFT140Q96RY7 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
IFT140Q96RY7 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
IFT140Q96RY7 AC068538.1-201ENST00000376856 336 ntBASIC9.26□□□□□ -0.93
IFT140Q96RY7 RNU6-398P-201ENST00000384143 109 ntBASIC9.26□□□□□ -0.93
IFT140Q96RY7 MIR640-201ENST00000385086 96 ntBASIC9.26□□□□□ -0.93
IFT140Q96RY7 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
IFT140Q96RY7 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC9.26□□□□□ -0.93
IFT140Q96RY7 AL078599.1-201ENST00000402075 293 ntBASIC9.26□□□□□ -0.93
IFT140Q96RY7 AC019050.1-201ENST00000418508 492 ntBASIC9.26□□□□□ -0.93
IFT140Q96RY7 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
IFT140Q96RY7 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC9.26□□□□□ -0.93
IFT140Q96RY7 AL161722.1-201ENST00000446972 1032 ntBASIC9.26□□□□□ -0.93
IFT140Q96RY7 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC9.26□□□□□ -0.93
IFT140Q96RY7 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC9.26□□□□□ -0.93
IFT140Q96RY7 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
IFT140Q96RY7 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC9.26□□□□□ -0.93
IFT140Q96RY7 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC9.26□□□□□ -0.93
IFT140Q96RY7 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC9.26□□□□□ -0.93
IFT140Q96RY7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
IFT140Q96RY7 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC9.26□□□□□ -0.93
IFT140Q96RY7 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
IFT140Q96RY7 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
IFT140Q96RY7 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
IFT140Q96RY7 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC9.25□□□□□ -0.93
IFT140Q96RY7 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
IFT140Q96RY7 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
IFT140Q96RY7 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
IFT140Q96RY7 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
IFT140Q96RY7 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
IFT140Q96RY7 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC9.25□□□□□ -0.93
IFT140Q96RY7 RPL7L1P3-201ENST00000455249 689 ntBASIC9.25□□□□□ -0.93
IFT140Q96RY7 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC9.25□□□□□ -0.93
IFT140Q96RY7 MIR5096-201ENST00000583713 70 ntBASIC9.25□□□□□ -0.93
IFT140Q96RY7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms