Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 CASC19-238ENST00000641523 1558 ntBASIC5.97□□□□□ -1.45
C9orf72Q96LT7 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf72Q96LT7 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
C9orf72Q96LT7 AL592429.1-201ENST00000403909 1473 ntBASIC5.96□□□□□ -1.45
C9orf72Q96LT7 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
C9orf72Q96LT7 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
C9orf72Q96LT7 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
C9orf72Q96LT7 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 MFSD8-219ENST00000641228 2559 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 AL137141.1-201ENST00000624622 4836 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 AC104964.3-201ENST00000606115 2860 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 RNA5SP122-201ENST00000384457 108 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 RN7SKP279-201ENST00000411383 298 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 AC066692.1-201ENST00000421721 457 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 OR5W1P-201ENST00000423705 938 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 RPL5P2-201ENST00000429598 854 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 AC138761.5-201ENST00000433967 325 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 RPS23P9-201ENST00000448848 438 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 UGT2A3P7-201ENST00000510485 734 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 RN7SKP238-201ENST00000516483 249 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 NANOGNBP2-201ENST00000544753 553 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 GARSP1-201ENST00000570895 719 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 TXNP4-201ENST00000575018 310 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 AL049840.6-201ENST00000604583 345 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 AL353729.2-201ENST00000605859 1249 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 AC015712.7-201ENST00000615211 635 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 AL445670.1-201ENST00000618889 801 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 AC129778.1-202ENST00000623812 261 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 AL355480.1-201ENST00000629041 99 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 AL591379.1-207ENST00000635982 261 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 AP000550.3-201ENST00000637734 379 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 MTND5P12-201ENST00000502851 1449 ntBASIC5.96□□□□□ -1.46
C9orf72Q96LT7 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
C9orf72Q96LT7 NLRP3P1-201ENST00000622303 1785 ntBASIC5.95□□□□□ -1.46
C9orf72Q96LT7 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 RN7SKP269-201ENST00000365545 319 ntBASIC5.95□□□□□ -1.46
C9orf72Q96LT7 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 RPL11P3-201ENST00000395256 523 ntBASIC5.95□□□□□ -1.46
C9orf72Q96LT7 HMGN1P20-201ENST00000411849 300 ntBASIC5.95□□□□□ -1.46
C9orf72Q96LT7 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 AL158827.1-201ENST00000416300 391 ntBASIC5.95□□□□□ -1.46
C9orf72Q96LT7 AL445928.1-201ENST00000435545 222 ntBASIC5.95□□□□□ -1.46
C9orf72Q96LT7 MTND2P40-201ENST00000436718 841 ntBASIC5.95□□□□□ -1.46
C9orf72Q96LT7 RNA5SP340-201ENST00000517132 107 ntBASIC5.95□□□□□ -1.46
C9orf72Q96LT7 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 AC110056.1-201ENST00000525759 911 ntBASIC5.95□□□□□ -1.46
C9orf72Q96LT7 AP003396.4-201ENST00000527574 265 ntBASIC5.95□□□□□ -1.46
C9orf72Q96LT7 OR4A42P-201ENST00000531397 938 ntBASIC5.95□□□□□ -1.46
C9orf72Q96LT7 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 AC007956.1-201ENST00000555623 542 ntBASIC5.95□□□□□ -1.46
C9orf72Q96LT7 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 AC125494.2-201ENST00000602431 657 ntBASIC5.95□□□□□ -1.46
C9orf72Q96LT7 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
C9orf72Q96LT7 AC008627.1-201ENST00000517511 1704 ntBASIC5.94□□□□□ -1.46
C9orf72Q96LT7 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms