Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC104458.1-201ENST00000608243 463 ntBASIC8.5□□□□□ -1.05
TRIM47Q96LD4 MIR6849-201ENST00000618543 69 ntBASIC8.5□□□□□ -1.05
TRIM47Q96LD4 AL359757.1-201ENST00000623176 255 ntBASIC8.5□□□□□ -1.05
TRIM47Q96LD4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC8.5□□□□□ -1.05
TRIM47Q96LD4 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC8.5□□□□□ -1.05
TRIM47Q96LD4 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
TRIM47Q96LD4 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TRIM47Q96LD4 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TRIM47Q96LD4 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.5□□□□□ -1.05
TRIM47Q96LD4 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TRIM47Q96LD4 AL035555.1-201ENST00000404462 1790 ntBASIC8.5□□□□□ -1.05
TRIM47Q96LD4 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC8.5□□□□□ -1.05
TRIM47Q96LD4 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC8.5□□□□□ -1.05
TRIM47Q96LD4 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TRIM47Q96LD4 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 LRRC37A15P-201ENST00000514785 1355 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 OR2A3P-202ENST00000641249 1776 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 TMSB4XP4-201ENST00000323496 618 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 MT-TL1-201ENST00000386347 75 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 MIR1266-201ENST00000408125 84 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 RNU6-920P-201ENST00000410926 92 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AC006509.1-201ENST00000420788 634 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 ARL2BPP3-201ENST00000421226 480 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 FTH1P5-201ENST00000425761 545 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 RPL12P11-201ENST00000439970 501 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 CYCSP44-201ENST00000448560 313 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 Z95152.1-201ENST00000453556 656 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 OR6K1P-201ENST00000456766 971 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AC004890.1-201ENST00000461005 181 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 KLF3P2-201ENST00000465138 268 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 RPSAP48-201ENST00000466509 889 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 OR11I1P-201ENST00000486033 954 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 GAPDHP61-201ENST00000507324 1005 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AC008496.1-201ENST00000509131 295 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 OR4A21P-201ENST00000532759 944 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 ASB8-207ENST00000536953 923 ntTSL 2 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AC087465.1-201ENST00000560574 245 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AC010287.1-201ENST00000566916 357 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 GARSP1-201ENST00000570895 719 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AC024267.2-201ENST00000582737 417 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 WDR45BP1-201ENST00000583470 1029 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AC006504.3-201ENST00000586818 523 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AC083899.3-201ENST00000603413 594 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AC016877.3-201ENST00000606778 504 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 SNORA35B-201ENST00000607417 129 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 HOTTIP_2.1-201ENST00000616633 376 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AC002553.4-201ENST00000616896 331 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AC090574.1-201ENST00000623186 233 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AC211433.3-201ENST00000623770 375 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 SNORA43.5-201ENST00000631270 138 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 AP000766.1-201ENST00000561746 4140 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 CCDC150P1-201ENST00000537123 2215 ntBASIC8.49□□□□□ -1.05
TRIM47Q96LD4 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
TRIM47Q96LD4 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRIM47Q96LD4 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRIM47Q96LD4 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRIM47Q96LD4 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC8.48□□□□□ -1.05
TRIM47Q96LD4 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRIM47Q96LD4 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.48□□□□□ -1.05
TRIM47Q96LD4 AL356317.1-201ENST00000396110 1436 ntBASIC8.48□□□□□ -1.05
TRIM47Q96LD4 AC092111.2-201ENST00000611627 1414 ntBASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms