Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL451142.1-201ENST00000375867 775 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 HMGA1P8-201ENST00000414130 321 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.79□□□□□ -1.32
HPS3Q969F9 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.79□□□□□ -1.32
HPS3Q969F9 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.79□□□□□ -1.32
HPS3Q969F9 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HPS3Q969F9 GLUD1P9-201ENST00000420997 1173 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.79□□□□□ -1.32
HPS3Q969F9 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.79□□□□□ -1.32
HPS3Q969F9 AL139158.1-201ENST00000424719 340 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.79□□□□□ -1.32
HPS3Q969F9 UBE2D3P3-201ENST00000426992 425 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HPS3Q969F9 FCF1P6-201ENST00000456841 595 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
HPS3Q969F9 RN7SKP248-201ENST00000516278 305 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 RNA5SP434-201ENST00000516647 121 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.79□□□□□ -1.32
HPS3Q969F9 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.79□□□□□ -1.32
HPS3Q969F9 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.79□□□□□ -1.32
HPS3Q969F9 AL121839.1-201ENST00000556233 1185 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.79□□□□□ -1.32
HPS3Q969F9 MRPS21P8-201ENST00000569196 235 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.79□□□□□ -1.32
HPS3Q969F9 AC090330.1-201ENST00000588646 764 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.79□□□□□ -1.32
HPS3Q969F9 SNORA74.4-201ENST00000607595 199 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 AC015922.4-201ENST00000612568 690 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 AC245389.2-201ENST00000616023 576 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 AC242843.1-201ENST00000618702 573 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 AC022960.3-201ENST00000619794 441 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.79□□□□□ -1.32
HPS3Q969F9 AC073488.6-201ENST00000632293 754 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 AL731532.1-201ENST00000623972 4236 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.79□□□□□ -1.32
HPS3Q969F9 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HPS3Q969F9 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HPS3Q969F9 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HPS3Q969F9 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
HPS3Q969F9 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.79□□□□□ -1.32
HPS3Q969F9 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HPS3Q969F9 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.79□□□□□ -1.32
HPS3Q969F9 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HPS3Q969F9 AC024651.2-201ENST00000562480 2098 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HPS3Q969F9 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
HPS3Q969F9 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HPS3Q969F9 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.78□□□□□ -1.32
HPS3Q969F9 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HPS3Q969F9 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
HPS3Q969F9 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HPS3Q969F9 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.78□□□□□ -1.32
HPS3Q969F9 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HPS3Q969F9 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HPS3Q969F9 RNU6-1251P-201ENST00000364502 107 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.78□□□□□ -1.32
HPS3Q969F9 SNORD65-201ENST00000391079 73 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 AL035405.1-201ENST00000400795 710 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.78□□□□□ -1.32
HPS3Q969F9 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.78□□□□□ -1.32
HPS3Q969F9 CDY17P-201ENST00000414121 1282 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HPS3Q969F9 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HPS3Q969F9 MTCO1P51-201ENST00000427672 1060 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 CDY8P-201ENST00000428380 1279 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.78□□□□□ -1.32
HPS3Q969F9 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.78□□□□□ -1.32
HPS3Q969F9 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.78□□□□□ -1.32
HPS3Q969F9 AC245517.2-201ENST00000442890 346 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.78□□□□□ -1.32
HPS3Q969F9 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.78□□□□□ -1.32
HPS3Q969F9 CDY20P-201ENST00000447528 1279 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.78□□□□□ -1.32
HPS3Q969F9 CCRL1P1-201ENST00000449542 1053 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 LDHBP2-201ENST00000456969 1005 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HPS3Q969F9 OR6M2P-201ENST00000529831 871 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 NPIPB14P-203ENST00000532298 987 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
HPS3Q969F9 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.78□□□□□ -1.32
HPS3Q969F9 AL078601.3-201ENST00000573303 535 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 MIR4310-201ENST00000582950 57 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
HPS3Q969F9 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.78□□□□□ -1.32
HPS3Q969F9 AL355816.2-201ENST00000610049 647 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 MIR6721-201ENST00000617181 87 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.78□□□□□ -1.32
HPS3Q969F9 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.78□□□□□ -1.32
HPS3Q969F9 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.78□□□□□ -1.32
HPS3Q969F9 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HPS3Q969F9 AL359091.1-201ENST00000449048 1734 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HPS3Q969F9 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.78□□□□□ -1.32
HPS3Q969F9 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.78□□□□□ -1.32
HPS3Q969F9 AC093297.3-201ENST00000607056 2517 ntBASIC6.78□□□□□ -1.32
HPS3Q969F9 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
HPS3Q969F9 AL355377.1-201ENST00000621125 1653 ntBASIC6.77□□□□□ -1.32
HPS3Q969F9 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
HPS3Q969F9 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms