Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SYNE4Q8N205 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SYNE4Q8N205 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SYNE4Q8N205 AL159987.1-201ENST00000347911 293 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 AP000534.2-201ENST00000412729 568 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 AL357752.1-201ENST00000412817 349 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.32□□□□□ -1.24
SYNE4Q8N205 NFYAP1-201ENST00000431953 972 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 FMO7P-201ENST00000436045 768 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.32□□□□□ -1.24
SYNE4Q8N205 VN1R96P-201ENST00000446052 858 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 AL606490.1-201ENST00000452266 765 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.32□□□□□ -1.24
SYNE4Q8N205 RAB28P2-201ENST00000454299 641 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 CYCSP53-201ENST00000455540 265 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 AC011225.1-201ENST00000457751 369 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 COPS8P2-201ENST00000473228 627 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 RN7SL727P-201ENST00000482164 296 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 RPL32P33-201ENST00000487023 394 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 AP000926.3-201ENST00000497201 299 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 AC231760.1-201ENST00000498002 260 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 AC093763.2-201ENST00000505334 1223 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 AC114322.1-201ENST00000506771 926 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC7.32□□□□□ -1.24
SYNE4Q8N205 RNU6-615P-201ENST00000516065 106 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 RNA5SP92-201ENST00000516437 110 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 SCARNA6.1-201ENST00000516989 238 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.32□□□□□ -1.24
SYNE4Q8N205 HMGB1P42-201ENST00000532126 553 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 AC078878.1-201ENST00000539832 958 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC7.32□□□□□ -1.24
SYNE4Q8N205 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC7.32□□□□□ -1.24
SYNE4Q8N205 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.32□□□□□ -1.24
SYNE4Q8N205 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.32□□□□□ -1.24
SYNE4Q8N205 AC007342.5-201ENST00000571340 2142 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC7.32□□□□□ -1.24
SYNE4Q8N205 AC026979.4-201ENST00000606555 645 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 AL139022.2-201ENST00000606934 443 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 AC018754.1-201ENST00000607486 925 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 AC091948.2-201ENST00000636510 279 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
SYNE4Q8N205 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
SYNE4Q8N205 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
SYNE4Q8N205 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SYNE4Q8N205 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SYNE4Q8N205 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
SYNE4Q8N205 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SYNE4Q8N205 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SYNE4Q8N205 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SYNE4Q8N205 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 HIST1H3PS1-201ENST00000404612 417 ntBASIC7.31□□□□□ -1.24
SYNE4Q8N205 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 RN7SKP166-201ENST00000410812 305 ntBASIC7.31□□□□□ -1.24
SYNE4Q8N205 RNU2-72P-201ENST00000411175 163 ntBASIC7.31□□□□□ -1.24
SYNE4Q8N205 GABARAPL3-201ENST00000412799 354 ntBASIC7.31□□□□□ -1.24
SYNE4Q8N205 AK4P4-201ENST00000419465 646 ntBASIC7.31□□□□□ -1.24
SYNE4Q8N205 OR5W1P-201ENST00000423705 938 ntBASIC7.31□□□□□ -1.24
SYNE4Q8N205 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 MTCYBP15-201ENST00000433123 1127 ntBASIC7.31□□□□□ -1.24
SYNE4Q8N205 AL663074.2-201ENST00000440621 479 ntBASIC7.31□□□□□ -1.24
SYNE4Q8N205 MORF4L1P4-201ENST00000450245 976 ntBASIC7.31□□□□□ -1.24
SYNE4Q8N205 MTND3P4-201ENST00000453537 303 ntBASIC7.31□□□□□ -1.24
SYNE4Q8N205 AL049634.1-201ENST00000453770 1720 ntBASIC7.31□□□□□ -1.24
SYNE4Q8N205 AC007386.1-201ENST00000455212 582 ntBASIC7.31□□□□□ -1.24
SYNE4Q8N205 RN7SL826P-201ENST00000479724 288 ntBASIC7.31□□□□□ -1.24
SYNE4Q8N205 RPL38P3-201ENST00000484463 213 ntBASIC7.31□□□□□ -1.24
SYNE4Q8N205 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 AC024940.4-201ENST00000605507 246 ntBASIC7.31□□□□□ -1.24
SYNE4Q8N205 NF1P10-201ENST00000613227 742 ntBASIC7.31□□□□□ -1.24
SYNE4Q8N205 AL031651.1-201ENST00000615357 1438 ntBASIC7.31□□□□□ -1.24
SYNE4Q8N205 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SYNE4Q8N205 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SYNE4Q8N205 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
SYNE4Q8N205 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SYNE4Q8N205 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
SYNE4Q8N205 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNE4Q8N205 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.3□□□□□ -1.24
SYNE4Q8N205 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
SYNE4Q8N205 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNE4Q8N205 RN7SKP151-201ENST00000410230 316 ntBASIC7.3□□□□□ -1.24
SYNE4Q8N205 TNPO1P1-201ENST00000423641 1138 ntBASIC7.3□□□□□ -1.24
SYNE4Q8N205 SCAND3P1-201ENST00000439854 1060 ntBASIC7.3□□□□□ -1.24
SYNE4Q8N205 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.3□□□□□ -1.24
SYNE4Q8N205 AC005297.1-201ENST00000444765 862 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms