Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RAB28P2-201ENST00000454299 641 ntBASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 AC044810.1-201ENST00000480271 711 ntBASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 RPL23AP40-201ENST00000487630 390 ntBASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 AC112484.3-201ENST00000505910 329 ntBASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 AP000620.1-201ENST00000527147 504 ntBASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 AL049779.3-201ENST00000557141 606 ntBASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 MRPS21P8-201ENST00000569196 235 ntBASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 AC068768.2-201ENST00000602352 343 ntBASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 AC084036.1-201ENST00000609190 508 ntBASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 AL359091.2-201ENST00000609303 556 ntBASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 AC015922.4-201ENST00000612568 690 ntBASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 AL357140.4-201ENST00000636827 412 ntBASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 NLRP3P1-201ENST00000622303 1785 ntBASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 RLIMP2-201ENST00000427891 1563 ntBASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 PPBPP2-201ENST00000513150 1362 ntBASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
NHLRC1Q6VVB1 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 CASC19-260ENST00000641828 2001 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 MTCO1P7-201ENST00000419523 1542 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 RNA5SP279-201ENST00000365513 117 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 SNORD65-201ENST00000391079 73 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 RN7SKP166-201ENST00000410812 305 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 RPL35AP3-201ENST00000414680 288 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 AL359885.1-201ENST00000415786 903 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 GLUD1P9-201ENST00000420997 1173 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 AC130360.1-201ENST00000425489 1117 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 CLNS1AP1-201ENST00000435954 682 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 SEPT14P12-201ENST00000442280 560 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 RPL5P7-201ENST00000444235 813 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 RSL24D1P2-201ENST00000445584 366 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 AL162739.1-201ENST00000450606 307 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 AC005165.2-201ENST00000466070 380 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 SNRPCP3-201ENST00000474888 476 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 SNORA48.9-201ENST00000516419 162 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 RNA5SP441-201ENST00000516809 88 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 IGKV3D-25-201ENST00000519599 235 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 AC130365.2-201ENST00000525882 1201 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 NPIPB14P-203ENST00000532298 987 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 RN7SL230P-201ENST00000580835 303 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 AC105105.5-201ENST00000622635 1294 ntBASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.4□□□□□ -1.54
NHLRC1Q6VVB1 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
NHLRC1Q6VVB1 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NHLRC1Q6VVB1 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
NHLRC1Q6VVB1 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NHLRC1Q6VVB1 KYNUP3-201ENST00000574386 1341 ntBASIC5.4□□□□□ -1.55
NHLRC1Q6VVB1 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.4□□□□□ -1.55
NHLRC1Q6VVB1 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NHLRC1Q6VVB1 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.4□□□□□ -1.55
NHLRC1Q6VVB1 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NHLRC1Q6VVB1 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NHLRC1Q6VVB1 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NHLRC1Q6VVB1 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.39□□□□□ -1.55
NHLRC1Q6VVB1 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.39□□□□□ -1.55
NHLRC1Q6VVB1 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.39□□□□□ -1.55
NHLRC1Q6VVB1 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.39□□□□□ -1.55
NHLRC1Q6VVB1 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms