Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC9.2□□□□□ -0.94
SNAPC4Q5SXM2 AP000346.3-201ENST00000622821 210 ntBASIC9.2□□□□□ -0.94
SNAPC4Q5SXM2 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SNAPC4Q5SXM2 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SNAPC4Q5SXM2 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC9.2□□□□□ -0.94
SNAPC4Q5SXM2 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SNAPC4Q5SXM2 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
SNAPC4Q5SXM2 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC9.19□□□□□ -0.94
SNAPC4Q5SXM2 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
SNAPC4Q5SXM2 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC9.19□□□□□ -0.94
SNAPC4Q5SXM2 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SNAPC4Q5SXM2 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SNAPC4Q5SXM2 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SNAPC4Q5SXM2 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SNAPC4Q5SXM2 AL353626.3-201ENST00000413399 657 ntBASIC9.19□□□□□ -0.94
SNAPC4Q5SXM2 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC9.19□□□□□ -0.94
SNAPC4Q5SXM2 AC009963.2-201ENST00000453431 138 ntBASIC9.19□□□□□ -0.94
SNAPC4Q5SXM2 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC9.19□□□□□ -0.94
SNAPC4Q5SXM2 MIR2117-201ENST00000516780 80 ntBASIC9.19□□□□□ -0.94
SNAPC4Q5SXM2 HMGB1P40-201ENST00000525121 540 ntBASIC9.19□□□□□ -0.94
SNAPC4Q5SXM2 AC068790.4-201ENST00000602474 263 ntBASIC9.19□□□□□ -0.94
SNAPC4Q5SXM2 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
SNAPC4Q5SXM2 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 AC079922.1-201ENST00000443291 359 ntBASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 TRY2P-201ENST00000448860 689 ntBASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 RPL37AP8-201ENST00000494116 276 ntBASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 AC090424.1-201ENST00000535243 736 ntBASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 AC091193.1-201ENST00000604640 448 ntBASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 INTS6P1-201ENST00000504674 2530 ntBASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNAPC4Q5SXM2 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 HSPA8P14-201ENST00000552265 1805 ntBASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 TMA16P2-201ENST00000413187 601 ntBASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 C4BPAP2-201ENST00000428434 478 ntBASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 DUTP1-201ENST00000493631 470 ntBASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 OR55B1P-203ENST00000641518 2602 ntBASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNAPC4Q5SXM2 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 RAD17P2-201ENST00000451754 1977 ntBASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 AL138878.2-201ENST00000440581 1241 ntBASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 AC002075.1-201ENST00000457396 676 ntBASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 CYP4F27P-201ENST00000514557 494 ntBASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC9.16□□□□□ -0.94
SNAPC4Q5SXM2 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms