Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.37□□□□□ -1.87
HSPG2P98160 BNIP3P11-201ENST00000603878 563 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.37□□□□□ -1.87
HSPG2P98160 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC3.37□□□□□ -1.87
HSPG2P98160 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.37□□□□□ -1.87
HSPG2P98160 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
HSPG2P98160 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HSPG2P98160 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC3.37□□□□□ -1.87
HSPG2P98160 CAST-202ENST00000325674 3356 ntTSL 5 BASIC3.37□□□□□ -1.87
HSPG2P98160 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
HSPG2P98160 AC139713.2-214ENST00000642059 1811 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC3.37□□□□□ -1.87
HSPG2P98160 RNA5SP387-201ENST00000364226 106 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
HSPG2P98160 RPL17P36-201ENST00000420302 549 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 DNAJC19P7-201ENST00000428811 344 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 AC023141.6-201ENST00000429418 337 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC3.37□□□□□ -1.87
HSPG2P98160 EDDM3DP-201ENST00000554692 434 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC3.37□□□□□ -1.87
HSPG2P98160 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC3.37□□□□□ -1.87
HSPG2P98160 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC3.37□□□□□ -1.87
HSPG2P98160 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC3.37□□□□□ -1.87
HSPG2P98160 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HSPG2P98160 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC3.37□□□□□ -1.87
HSPG2P98160 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HSPG2P98160 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC3.37□□□□□ -1.87
HSPG2P98160 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC3.37□□□□□ -1.87
HSPG2P98160 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC3.37□□□□□ -1.87
HSPG2P98160 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.37□□□□□ -1.87
HSPG2P98160 NPM1P33-201ENST00000438918 872 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 IGKV1OR22-5-201ENST00000458718 354 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC3.37□□□□□ -1.87
HSPG2P98160 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.37□□□□□ -1.87
HSPG2P98160 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
HSPG2P98160 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
HSPG2P98160 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC3.36□□□□□ -1.87
HSPG2P98160 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
HSPG2P98160 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
HSPG2P98160 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
HSPG2P98160 AP000350.7-201ENST00000624923 8030 ntBASIC3.36□□□□□ -1.87
HSPG2P98160 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
HSPG2P98160 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC3.36□□□□□ -1.87
HSPG2P98160 AP003170.5-201ENST00000397185 335 ntBASIC3.36□□□□□ -1.87
HSPG2P98160 AC025750.1-201ENST00000399891 379 ntBASIC3.36□□□□□ -1.87
HSPG2P98160 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.36□□□□□ -1.87
HSPG2P98160 AC009480.2-201ENST00000422916 432 ntBASIC3.36□□□□□ -1.87
HSPG2P98160 RPL7P57-201ENST00000423238 740 ntBASIC3.36□□□□□ -1.87
HSPG2P98160 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 AC112498.1-201ENST00000444401 332 ntBASIC3.36□□□□□ -1.87
HSPG2P98160 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC3.36□□□□□ -1.87
HSPG2P98160 IGHVIII-13-1-201ENST00000517613 291 ntBASIC3.36□□□□□ -1.87
HSPG2P98160 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC3.36□□□□□ -1.87
HSPG2P98160 AC019193.2-201ENST00000610012 634 ntBASIC3.36□□□□□ -1.87
HSPG2P98160 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC3.36□□□□□ -1.87
HSPG2P98160 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC3.36□□□□□ -1.87
HSPG2P98160 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 ANO3-201ENST00000256737 6642 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC3.36□□□□□ -1.87
HSPG2P98160 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HSPG2P98160 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC3.36□□□□□ -1.87
HSPG2P98160 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
HSPG2P98160 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HSPG2P98160 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.36□□□□□ -1.87
HSPG2P98160 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC3.36□□□□□ -1.87
HSPG2P98160 AC005154.2-201ENST00000438110 379 ntBASIC3.36□□□□□ -1.87
HSPG2P98160 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC3.36□□□□□ -1.87
HSPG2P98160 MORF4L1P3-201ENST00000525966 950 ntBASIC3.36□□□□□ -1.87
HSPG2P98160 AC093227.2-201ENST00000589357 285 ntBASIC3.36□□□□□ -1.87
HSPG2P98160 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
HSPG2P98160 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC3.36□□□□□ -1.87
HSPG2P98160 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HSPG2P98160 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HSPG2P98160 AC104162.1-201ENST00000430831 2382 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms