Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
UBA52P62987 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBA52P62987 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBA52P62987 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.1□□□□□ -1.59
UBA52P62987 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBA52P62987 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
UBA52P62987 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBA52P62987 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
UBA52P62987 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBA52P62987 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
UBA52P62987 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
UBA52P62987 SUGT1P2-201ENST00000379452 992 ntBASIC5.1□□□□□ -1.59
UBA52P62987 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
UBA52P62987 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
UBA52P62987 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBA52P62987 AL358178.1-201ENST00000407698 397 ntBASIC5.1□□□□□ -1.59
UBA52P62987 RN7SKP144-201ENST00000411108 279 ntBASIC5.1□□□□□ -1.59
UBA52P62987 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.1□□□□□ -1.59
UBA52P62987 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.1□□□□□ -1.59
UBA52P62987 AL157884.1-201ENST00000424561 454 ntBASIC5.1□□□□□ -1.59
UBA52P62987 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.1□□□□□ -1.59
UBA52P62987 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
UBA52P62987 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.1□□□□□ -1.59
UBA52P62987 AL353743.3-201ENST00000442109 1468 ntBASIC5.1□□□□□ -1.59
UBA52P62987 AL590004.3-202ENST00000445883 451 ntBASIC5.1□□□□□ -1.59
UBA52P62987 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBA52P62987 PPIAP7-201ENST00000454070 489 ntBASIC5.1□□□□□ -1.59
UBA52P62987 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.1□□□□□ -1.59
UBA52P62987 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.1□□□□□ -1.59
UBA52P62987 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.1□□□□□ -1.59
UBA52P62987 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.1□□□□□ -1.59
UBA52P62987 IGHV4-55-201ENST00000520889 368 ntBASIC5.1□□□□□ -1.59
UBA52P62987 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.1□□□□□ -1.59
UBA52P62987 NATP-201ENST00000523491 878 ntBASIC5.1□□□□□ -1.59
UBA52P62987 AP000620.1-201ENST00000527147 504 ntBASIC5.1□□□□□ -1.59
UBA52P62987 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.1□□□□□ -1.59
UBA52P62987 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
UBA52P62987 LINC00556-201ENST00000569603 412 ntBASIC5.1□□□□□ -1.59
UBA52P62987 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.1□□□□□ -1.59
UBA52P62987 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.1□□□□□ -1.59
UBA52P62987 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.1□□□□□ -1.59
UBA52P62987 AC007786.3-201ENST00000615154 596 ntBASIC5.1□□□□□ -1.59
UBA52P62987 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.1□□□□□ -1.59
UBA52P62987 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.1□□□□□ -1.59
UBA52P62987 AC023632.6-201ENST00000624338 2177 ntBASIC5.1□□□□□ -1.59
UBA52P62987 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.1□□□□□ -1.59
UBA52P62987 AC129915.3-201ENST00000634128 948 ntBASIC5.1□□□□□ -1.59
UBA52P62987 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.1□□□□□ -1.59
UBA52P62987 AC103703.1-201ENST00000634783 663 ntBASIC5.1□□□□□ -1.59
UBA52P62987 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.1□□□□□ -1.59
UBA52P62987 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
UBA52P62987 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
UBA52P62987 MAPK10-328ENST00000641553 4009 ntBASIC5.1□□□□□ -1.59
UBA52P62987 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBA52P62987 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
UBA52P62987 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBA52P62987 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBA52P62987 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
UBA52P62987 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBA52P62987 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBA52P62987 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.09□□□□□ -1.59
UBA52P62987 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
UBA52P62987 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBA52P62987 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
UBA52P62987 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBA52P62987 AC003985.2-201ENST00000562268 1669 ntBASIC5.09□□□□□ -1.59
UBA52P62987 SAGE3P-201ENST00000619800 1635 ntBASIC5.09□□□□□ -1.59
UBA52P62987 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
UBA52P62987 MTCO1P11-201ENST00000429111 1528 ntBASIC5.09□□□□□ -1.59
UBA52P62987 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
UBA52P62987 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
UBA52P62987 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBA52P62987 AL354854.1-201ENST00000455940 1363 ntBASIC5.09□□□□□ -1.59
UBA52P62987 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
UBA52P62987 OR7E25P-201ENST00000344844 931 ntBASIC5.09□□□□□ -1.59
UBA52P62987 MIR130B-202ENST00000385018 82 ntBASIC5.09□□□□□ -1.59
UBA52P62987 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
UBA52P62987 RN7SKP229-201ENST00000410465 302 ntBASIC5.09□□□□□ -1.59
UBA52P62987 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.09□□□□□ -1.59
UBA52P62987 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.09□□□□□ -1.59
UBA52P62987 REREP1Y-201ENST00000422655 198 ntBASIC5.09□□□□□ -1.59
UBA52P62987 CHEK2P5-201ENST00000423877 246 ntBASIC5.09□□□□□ -1.59
UBA52P62987 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.09□□□□□ -1.59
UBA52P62987 RPL23AP19-201ENST00000436229 369 ntBASIC5.09□□□□□ -1.59
UBA52P62987 REREP2Y-201ENST00000439103 200 ntBASIC5.09□□□□□ -1.59
UBA52P62987 GAPDHP14-201ENST00000450472 937 ntBASIC5.09□□□□□ -1.59
UBA52P62987 NXT1P1-201ENST00000458481 316 ntBASIC5.09□□□□□ -1.59
UBA52P62987 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
UBA52P62987 OR4D12P-201ENST00000509361 911 ntBASIC5.09□□□□□ -1.59
UBA52P62987 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.09□□□□□ -1.59
UBA52P62987 HMGN2P47-201ENST00000559378 272 ntBASIC5.09□□□□□ -1.59
UBA52P62987 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.09□□□□□ -1.59
UBA52P62987 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.09□□□□□ -1.59
UBA52P62987 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.09□□□□□ -1.59
UBA52P62987 RN7SL475P-201ENST00000583379 298 ntBASIC5.09□□□□□ -1.59
UBA52P62987 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.09□□□□□ -1.59
UBA52P62987 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.09□□□□□ -1.59
UBA52P62987 AL008723.3-201ENST00000608926 449 ntBASIC5.09□□□□□ -1.59
UBA52P62987 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.09□□□□□ -1.59
UBA52P62987 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms