Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.31□□□□□ -1.4
SSR1P43307 AP001000.1-201ENST00000526843 742 ntBASIC6.31□□□□□ -1.4
SSR1P43307 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSR1P43307 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.31□□□□□ -1.4
SSR1P43307 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.31□□□□□ -1.4
SSR1P43307 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SSR1P43307 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.31□□□□□ -1.4
SSR1P43307 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.31□□□□□ -1.4
SSR1P43307 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.31□□□□□ -1.4
SSR1P43307 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.31□□□□□ -1.4
SSR1P43307 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.31□□□□□ -1.4
SSR1P43307 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.31□□□□□ -1.4
SSR1P43307 AL645933.2-201ENST00000606743 1207 ntBASIC6.31□□□□□ -1.4
SSR1P43307 AC005828.7-201ENST00000607331 556 ntBASIC6.31□□□□□ -1.4
SSR1P43307 AC015819.1-201ENST00000613588 663 ntBASIC6.31□□□□□ -1.4
SSR1P43307 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.31□□□□□ -1.4
SSR1P43307 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSR1P43307 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.31□□□□□ -1.4
SSR1P43307 AC021242.1-201ENST00000507315 2035 ntBASIC6.31□□□□□ -1.4
SSR1P43307 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSR1P43307 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSR1P43307 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
SSR1P43307 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSR1P43307 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.31□□□□□ -1.4
SSR1P43307 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
SSR1P43307 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSR1P43307 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSR1P43307 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.3□□□□□ -1.4
SSR1P43307 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.3□□□□□ -1.4
SSR1P43307 THAP12P9-201ENST00000503971 2360 ntBASIC6.3□□□□□ -1.4
SSR1P43307 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.3□□□□□ -1.4
SSR1P43307 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.3□□□□□ -1.4
SSR1P43307 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SSR1P43307 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSR1P43307 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.3□□□□□ -1.4
SSR1P43307 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.3□□□□□ -1.4
SSR1P43307 NMD3P2-201ENST00000421815 761 ntBASIC6.3□□□□□ -1.4
SSR1P43307 AC092865.3-201ENST00000425390 1026 ntBASIC6.3□□□□□ -1.4
SSR1P43307 AC092651.1-201ENST00000426110 312 ntBASIC6.3□□□□□ -1.4
SSR1P43307 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.3□□□□□ -1.4
SSR1P43307 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.3□□□□□ -1.4
SSR1P43307 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.3□□□□□ -1.4
SSR1P43307 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.3□□□□□ -1.4
SSR1P43307 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.3□□□□□ -1.4
SSR1P43307 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.3□□□□□ -1.4
SSR1P43307 RNA5SP434-201ENST00000516647 121 ntBASIC6.3□□□□□ -1.4
SSR1P43307 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC6.3□□□□□ -1.4
SSR1P43307 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSR1P43307 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.3□□□□□ -1.4
SSR1P43307 AC004232.2-201ENST00000574245 821 ntBASIC6.3□□□□□ -1.4
SSR1P43307 MIR744-201ENST00000578242 98 ntBASIC6.3□□□□□ -1.4
SSR1P43307 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.3□□□□□ -1.4
SSR1P43307 BNIP3P41-202ENST00000616656 861 ntBASIC6.3□□□□□ -1.4
SSR1P43307 AL512652.1-201ENST00000619006 500 ntBASIC6.3□□□□□ -1.4
SSR1P43307 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.3□□□□□ -1.4
SSR1P43307 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.3□□□□□ -1.4
SSR1P43307 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.3□□□□□ -1.4
SSR1P43307 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSR1P43307 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSR1P43307 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.3□□□□□ -1.4
SSR1P43307 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.3□□□□□ -1.4
SSR1P43307 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSR1P43307 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSR1P43307 MTCO1P28-201ENST00000574177 1528 ntBASIC6.3□□□□□ -1.4
SSR1P43307 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSR1P43307 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSR1P43307 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
SSR1P43307 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSR1P43307 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSR1P43307 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
SSR1P43307 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.29□□□□□ -1.4
SSR1P43307 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSR1P43307 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSR1P43307 SNORA21-201ENST00000362423 132 ntBASIC6.29□□□□□ -1.4
SSR1P43307 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SSR1P43307 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.29□□□□□ -1.4
SSR1P43307 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.29□□□□□ -1.4
SSR1P43307 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.29□□□□□ -1.4
SSR1P43307 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.29□□□□□ -1.4
SSR1P43307 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.29□□□□□ -1.4
SSR1P43307 AL591363.1-201ENST00000450091 483 ntBASIC6.29□□□□□ -1.4
SSR1P43307 OR7E22P-201ENST00000478335 1035 ntBASIC6.29□□□□□ -1.4
SSR1P43307 AC020779.1-201ENST00000478757 796 ntBASIC6.29□□□□□ -1.4
SSR1P43307 TRBV5-2-201ENST00000489095 273 ntBASIC6.29□□□□□ -1.4
SSR1P43307 AC112484.3-201ENST00000505910 329 ntBASIC6.29□□□□□ -1.4
SSR1P43307 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.29□□□□□ -1.4
SSR1P43307 CR383658.1-201ENST00000514609 734 ntBASIC6.29□□□□□ -1.4
SSR1P43307 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.29□□□□□ -1.4
SSR1P43307 AC036111.2-201ENST00000533247 901 ntBASIC6.29□□□□□ -1.4
SSR1P43307 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.29□□□□□ -1.4
SSR1P43307 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.29□□□□□ -1.4
SSR1P43307 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.29□□□□□ -1.4
SSR1P43307 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.29□□□□□ -1.4
SSR1P43307 AC027228.2-201ENST00000567141 2154 ntBASIC6.29□□□□□ -1.4
SSR1P43307 AC007346.1-201ENST00000569208 867 ntBASIC6.29□□□□□ -1.4
SSR1P43307 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.29□□□□□ -1.4
SSR1P43307 RN7SL230P-201ENST00000580835 303 ntBASIC6.29□□□□□ -1.4
SSR1P43307 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.29□□□□□ -1.4
SSR1P43307 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.29□□□□□ -1.4
SSR1P43307 SNX18P12-201ENST00000624821 759 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms