Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.31□□□□□ -1.4
HOXD12P35452 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.31□□□□□ -1.4
HOXD12P35452 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.31□□□□□ -1.4
HOXD12P35452 AC090236.2-201ENST00000587933 1101 ntBASIC6.31□□□□□ -1.4
HOXD12P35452 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.31□□□□□ -1.4
HOXD12P35452 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.31□□□□□ -1.4
HOXD12P35452 BUB1P1-201ENST00000603541 607 ntBASIC6.31□□□□□ -1.4
HOXD12P35452 AL512506.1-201ENST00000613918 449 ntBASIC6.31□□□□□ -1.4
HOXD12P35452 AC006249.1-201ENST00000621223 471 ntBASIC6.31□□□□□ -1.4
HOXD12P35452 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD12P35452 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD12P35452 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD12P35452 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD12P35452 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.31□□□□□ -1.4
HOXD12P35452 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD12P35452 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.31□□□□□ -1.4
HOXD12P35452 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HOXD12P35452 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD12P35452 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD12P35452 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HOXD12P35452 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD12P35452 AL354854.1-201ENST00000455940 1363 ntBASIC6.31□□□□□ -1.4
HOXD12P35452 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HOXD12P35452 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HOXD12P35452 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.3□□□□□ -1.4
HOXD12P35452 AC107021.2-201ENST00000567714 2095 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
HOXD12P35452 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.3□□□□□ -1.4
HOXD12P35452 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.3□□□□□ -1.4
HOXD12P35452 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HOXD12P35452 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
HOXD12P35452 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HOXD12P35452 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.3□□□□□ -1.4
HOXD12P35452 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HOXD12P35452 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
HOXD12P35452 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
HOXD12P35452 AC125336.1-201ENST00000508893 2827 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HOXD12P35452 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.3□□□□□ -1.4
HOXD12P35452 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HOXD12P35452 MIR137-201ENST00000385223 102 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 RNU6-1176P-201ENST00000390955 107 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 LYPLA1P3-201ENST00000402650 695 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.3□□□□□ -1.4
HOXD12P35452 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HOXD12P35452 SCAND3P1-201ENST00000439854 1060 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 GXYLT1P1-201ENST00000446657 490 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.3□□□□□ -1.4
HOXD12P35452 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 AC092905.1-201ENST00000467527 949 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 AC105918.1-201ENST00000474399 838 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 RN7SL273P-201ENST00000481561 299 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 OR11I1P-201ENST00000486033 954 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 RN7SL714P-201ENST00000487050 298 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC6.3□□□□□ -1.4
HOXD12P35452 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.3□□□□□ -1.4
HOXD12P35452 PSMA2P2-201ENST00000504319 686 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HOXD12P35452 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.3□□□□□ -1.4
HOXD12P35452 SNORD46.2-201ENST00000516021 102 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.3□□□□□ -1.4
HOXD12P35452 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.3□□□□□ -1.4
HOXD12P35452 LINC00557-201ENST00000563184 1279 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.3□□□□□ -1.4
HOXD12P35452 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.3□□□□□ -1.4
HOXD12P35452 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.3□□□□□ -1.4
HOXD12P35452 AC008555.7-201ENST00000605008 583 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.3□□□□□ -1.4
HOXD12P35452 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
HOXD12P35452 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.3□□□□□ -1.4
HOXD12P35452 AP001264.1-201ENST00000620602 703 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HOXD12P35452 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.3□□□□□ -1.4
HOXD12P35452 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HOXD12P35452 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HOXD12P35452 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.3□□□□□ -1.4
HOXD12P35452 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HOXD12P35452 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HOXD12P35452 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HOXD12P35452 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.3□□□□□ -1.4
HOXD12P35452 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HOXD12P35452 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 SAMM50P1-201ENST00000455403 1399 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 AC010329.1-201ENST00000593903 8328 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 MTCO1P7-201ENST00000419523 1542 ntBASIC6.3□□□□□ -1.4
HOXD12P35452 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.3□□□□□ -1.4
HOXD12P35452 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HOXD12P35452 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HOXD12P35452 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXD12P35452 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HOXD12P35452 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXD12P35452 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
HOXD12P35452 AC119674.1-204ENST00000641348 1343 ntBASIC6.29□□□□□ -1.4
HOXD12P35452 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXD12P35452 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HOXD12P35452 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
HOXD12P35452 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXD12P35452 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.29□□□□□ -1.4
HOXD12P35452 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms