Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 PSMA2P2-201ENST00000504319 686 ntBASIC6.63□□□□□ -1.35
CIITAP33076 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.63□□□□□ -1.35
CIITAP33076 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.63□□□□□ -1.35
CIITAP33076 AC022826.1-201ENST00000519383 805 ntBASIC6.63□□□□□ -1.35
CIITAP33076 IGKV2-4-201ENST00000523070 340 ntBASIC6.63□□□□□ -1.35
CIITAP33076 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.63□□□□□ -1.35
CIITAP33076 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6.63□□□□□ -1.35
CIITAP33076 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.63□□□□□ -1.35
CIITAP33076 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.63□□□□□ -1.35
CIITAP33076 OOSP1P2-201ENST00000579644 351 ntBASIC6.63□□□□□ -1.35
CIITAP33076 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.63□□□□□ -1.35
CIITAP33076 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.63□□□□□ -1.35
CIITAP33076 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
CIITAP33076 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.63□□□□□ -1.35
CIITAP33076 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.63□□□□□ -1.35
CIITAP33076 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CIITAP33076 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CIITAP33076 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CIITAP33076 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CIITAP33076 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CIITAP33076 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CIITAP33076 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CIITAP33076 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CIITAP33076 AC005261.2-201ENST00000593427 4258 ntBASIC6.62□□□□□ -1.35
CIITAP33076 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.62□□□□□ -1.35
CIITAP33076 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CIITAP33076 ZNF101P1-201ENST00000435701 1720 ntBASIC6.62□□□□□ -1.35
CIITAP33076 AC090220.1-201ENST00000593078 1699 ntBASIC6.62□□□□□ -1.35
CIITAP33076 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CIITAP33076 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CIITAP33076 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CIITAP33076 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CIITAP33076 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CIITAP33076 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CIITAP33076 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CIITAP33076 RN7SKP292-201ENST00000365522 317 ntBASIC6.62□□□□□ -1.35
CIITAP33076 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.62□□□□□ -1.35
CIITAP33076 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.62□□□□□ -1.35
CIITAP33076 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.62□□□□□ -1.35
CIITAP33076 AC126120.1-201ENST00000431082 470 ntBASIC6.62□□□□□ -1.35
CIITAP33076 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC6.62□□□□□ -1.35
CIITAP33076 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.62□□□□□ -1.35
CIITAP33076 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CIITAP33076 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC6.62□□□□□ -1.35
CIITAP33076 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.62□□□□□ -1.35
CIITAP33076 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.62□□□□□ -1.35
CIITAP33076 UBFD1P1-201ENST00000473259 814 ntBASIC6.62□□□□□ -1.35
CIITAP33076 NENFP3-201ENST00000503735 313 ntBASIC6.62□□□□□ -1.35
CIITAP33076 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.62□□□□□ -1.35
CIITAP33076 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CIITAP33076 SNORD46.2-201ENST00000516021 102 ntBASIC6.62□□□□□ -1.35
CIITAP33076 RN7SKP248-201ENST00000516278 305 ntBASIC6.62□□□□□ -1.35
CIITAP33076 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.62□□□□□ -1.35
CIITAP33076 IGLV3-30-201ENST00000524362 298 ntBASIC6.62□□□□□ -1.35
CIITAP33076 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.62□□□□□ -1.35
CIITAP33076 AC090424.1-201ENST00000535243 736 ntBASIC6.62□□□□□ -1.35
CIITAP33076 AL121594.2-201ENST00000541658 472 ntBASIC6.62□□□□□ -1.35
CIITAP33076 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
CIITAP33076 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CIITAP33076 AP005431.1-201ENST00000618479 319 ntBASIC6.62□□□□□ -1.35
CIITAP33076 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.62□□□□□ -1.35
CIITAP33076 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CIITAP33076 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.62□□□□□ -1.35
CIITAP33076 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.62□□□□□ -1.35
CIITAP33076 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.62□□□□□ -1.35
CIITAP33076 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.62□□□□□ -1.35
CIITAP33076 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.62□□□□□ -1.35
CIITAP33076 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CIITAP33076 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.62□□□□□ -1.35
CIITAP33076 MAPK10-261ENST00000641050 3109 ntBASIC6.62□□□□□ -1.35
CIITAP33076 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CIITAP33076 TTC41P-205ENST00000551270 3963 ntBASIC6.62□□□□□ -1.35
CIITAP33076 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CIITAP33076 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CIITAP33076 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CIITAP33076 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CIITAP33076 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
CIITAP33076 CCAT2-201ENST00000630920 1752 ntBASIC6.62□□□□□ -1.35
CIITAP33076 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CIITAP33076 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CIITAP33076 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CIITAP33076 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.61□□□□□ -1.35
CIITAP33076 AL161756.3-201ENST00000641216 2071 ntBASIC6.61□□□□□ -1.35
CIITAP33076 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.61□□□□□ -1.35
CIITAP33076 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.61□□□□□ -1.35
CIITAP33076 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CIITAP33076 AC083799.1-201ENST00000366451 910 ntBASIC6.61□□□□□ -1.35
CIITAP33076 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
CIITAP33076 AL121977.1-201ENST00000401636 979 ntBASIC6.61□□□□□ -1.35
CIITAP33076 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.61□□□□□ -1.35
CIITAP33076 CDY17P-201ENST00000414121 1282 ntBASIC6.61□□□□□ -1.35
CIITAP33076 AK4P4-201ENST00000419465 646 ntBASIC6.61□□□□□ -1.35
CIITAP33076 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.61□□□□□ -1.35
CIITAP33076 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.61□□□□□ -1.35
CIITAP33076 MTND6P12-201ENST00000428247 522 ntBASIC6.61□□□□□ -1.35
CIITAP33076 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.61□□□□□ -1.35
CIITAP33076 TRIM60P13-201ENST00000432350 1283 ntBASIC6.61□□□□□ -1.35
CIITAP33076 AC015983.1-201ENST00000441577 373 ntBASIC6.61□□□□□ -1.35
CIITAP33076 AC023141.8-201ENST00000442554 208 ntBASIC6.61□□□□□ -1.35
CIITAP33076 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms