Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU6-1331P-201ENST00000363658 106 ntBASIC6.29□□□□□ -1.4
HOXC13P31276 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC13P31276 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
HOXC13P31276 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.29□□□□□ -1.4
HOXC13P31276 RNA5SP156-201ENST00000410250 110 ntBASIC6.29□□□□□ -1.4
HOXC13P31276 RPL35AP31-201ENST00000418340 337 ntBASIC6.29□□□□□ -1.4
HOXC13P31276 MARK2P12-201ENST00000420129 585 ntBASIC6.29□□□□□ -1.4
HOXC13P31276 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC13P31276 RAB9AP5-201ENST00000437794 597 ntBASIC6.29□□□□□ -1.4
HOXC13P31276 RAB9AP2-201ENST00000443911 597 ntBASIC6.29□□□□□ -1.4
HOXC13P31276 TRIM60P16-201ENST00000444048 694 ntBASIC6.29□□□□□ -1.4
HOXC13P31276 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC13P31276 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.29□□□□□ -1.4
HOXC13P31276 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.29□□□□□ -1.4
HOXC13P31276 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.29□□□□□ -1.4
HOXC13P31276 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.29□□□□□ -1.4
HOXC13P31276 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC13P31276 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.29□□□□□ -1.4
HOXC13P31276 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC13P31276 AC119403.2-201ENST00000590960 598 ntBASIC6.29□□□□□ -1.4
HOXC13P31276 AC079776.5-201ENST00000641920 211 ntBASIC6.29□□□□□ -1.4
HOXC13P31276 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC13P31276 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
HOXC13P31276 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC13P31276 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.29□□□□□ -1.4
HOXC13P31276 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC13P31276 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC13P31276 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.29□□□□□ -1.4
HOXC13P31276 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC13P31276 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC13P31276 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
HOXC13P31276 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC13P31276 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXC13P31276 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
HOXC13P31276 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
HOXC13P31276 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC13P31276 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC13P31276 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC13P31276 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC13P31276 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HOXC13P31276 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC13P31276 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HOXC13P31276 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HOXC13P31276 AL360271.1-201ENST00000395679 510 ntBASIC6.28□□□□□ -1.4
HOXC13P31276 AL391361.1-201ENST00000405580 489 ntBASIC6.28□□□□□ -1.4
HOXC13P31276 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC13P31276 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC13P31276 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HOXC13P31276 AC016027.5-201ENST00000427227 210 ntBASIC6.28□□□□□ -1.4
HOXC13P31276 CFL1P4-201ENST00000451536 498 ntBASIC6.28□□□□□ -1.4
HOXC13P31276 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC13P31276 AC124945.1-201ENST00000485133 188 ntBASIC6.28□□□□□ -1.4
HOXC13P31276 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC13P31276 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC13P31276 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC13P31276 AC008638.1-201ENST00000506035 866 ntBASIC6.28□□□□□ -1.4
HOXC13P31276 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC13P31276 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC13P31276 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC13P31276 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.28□□□□□ -1.4
HOXC13P31276 RPA2P1-201ENST00000556557 721 ntBASIC6.28□□□□□ -1.4
HOXC13P31276 SNORD39.2-201ENST00000579995 76 ntBASIC6.28□□□□□ -1.4
HOXC13P31276 MIR3176-201ENST00000582210 90 ntBASIC6.28□□□□□ -1.4
HOXC13P31276 AC010615.3-201ENST00000597319 394 ntBASIC6.28□□□□□ -1.4
HOXC13P31276 AL021707.7-201ENST00000607991 416 ntBASIC6.28□□□□□ -1.4
HOXC13P31276 AC096861.1-201ENST00000616652 240 ntBASIC6.28□□□□□ -1.4
HOXC13P31276 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HOXC13P31276 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC13P31276 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXC13P31276 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC13P31276 AC007114.2-201ENST00000576014 4281 ntBASIC6.28□□□□□ -1.4
HOXC13P31276 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HOXC13P31276 AC016583.1-201ENST00000624221 2431 ntBASIC6.28□□□□□ -1.4
HOXC13P31276 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC13P31276 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
HOXC13P31276 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
HOXC13P31276 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC13P31276 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC13P31276 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC13P31276 HSPD1P8-201ENST00000400121 1658 ntBASIC6.27□□□□□ -1.41
HOXC13P31276 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXC13P31276 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXC13P31276 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC13P31276 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
HOXC13P31276 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
HOXC13P31276 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC13P31276 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HOXC13P31276 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXC13P31276 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXC13P31276 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HOXC13P31276 AC245060.4-201ENST00000413293 1121 ntBASIC6.27□□□□□ -1.41
HOXC13P31276 AL096829.1-201ENST00000413677 457 ntBASIC6.27□□□□□ -1.41
HOXC13P31276 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXC13P31276 RPS7P8-201ENST00000418311 581 ntBASIC6.27□□□□□ -1.41
HOXC13P31276 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
HOXC13P31276 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXC13P31276 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXC13P31276 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXC13P31276 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXC13P31276 ZNF619P1-201ENST00000446539 752 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms