Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXA9P31269 MIR6719-201ENST00000622428 87 ntBASIC6.11□□□□□ -1.43
HOXA9P31269 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXA9P31269 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXA9P31269 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
HOXA9P31269 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXA9P31269 LINC02019-201ENST00000608605 2060 ntBASIC6.11□□□□□ -1.43
HOXA9P31269 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HOXA9P31269 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXA9P31269 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXA9P31269 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA9P31269 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA9P31269 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA9P31269 IMMTP1-201ENST00000435590 2219 ntBASIC6.1□□□□□ -1.43
HOXA9P31269 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA9P31269 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
HOXA9P31269 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HOXA9P31269 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXA9P31269 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXA9P31269 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA9P31269 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXA9P31269 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA9P31269 GAPDHP24-201ENST00000328713 983 ntBASIC6.1□□□□□ -1.43
HOXA9P31269 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXA9P31269 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HOXA9P31269 NPM1P38-201ENST00000403835 865 ntBASIC6.1□□□□□ -1.43
HOXA9P31269 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXA9P31269 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXA9P31269 TMA16P2-201ENST00000413187 601 ntBASIC6.1□□□□□ -1.43
HOXA9P31269 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.1□□□□□ -1.43
HOXA9P31269 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXA9P31269 FMO7P-201ENST00000436045 768 ntBASIC6.1□□□□□ -1.43
HOXA9P31269 AC023141.8-201ENST00000442554 208 ntBASIC6.1□□□□□ -1.43
HOXA9P31269 AL450996.1-201ENST00000445574 1202 ntBASIC6.1□□□□□ -1.43
HOXA9P31269 AL162739.1-201ENST00000450606 307 ntBASIC6.1□□□□□ -1.43
HOXA9P31269 AC011225.1-201ENST00000457751 369 ntBASIC6.1□□□□□ -1.43
HOXA9P31269 ACA64.4-201ENST00000459070 127 ntBASIC6.1□□□□□ -1.43
HOXA9P31269 RN7SL799P-201ENST00000475891 298 ntBASIC6.1□□□□□ -1.43
HOXA9P31269 PFN1P6-201ENST00000476786 399 ntBASIC6.1□□□□□ -1.43
HOXA9P31269 IGLV3-30-201ENST00000524362 298 ntBASIC6.1□□□□□ -1.43
HOXA9P31269 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.1□□□□□ -1.43
HOXA9P31269 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXA9P31269 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXA9P31269 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXA9P31269 AC015720.2-201ENST00000567709 334 ntBASIC6.1□□□□□ -1.43
HOXA9P31269 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXA9P31269 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXA9P31269 AL137246.2-201ENST00000613439 662 ntBASIC6.1□□□□□ -1.43
HOXA9P31269 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXA9P31269 AC004808.2-201ENST00000627965 773 ntBASIC6.1□□□□□ -1.43
HOXA9P31269 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXA9P31269 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA9P31269 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA9P31269 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXA9P31269 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXA9P31269 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA9P31269 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA9P31269 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HOXA9P31269 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HOXA9P31269 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXA9P31269 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXA9P31269 CASC19-248ENST00000641674 1356 ntBASIC6.09□□□□□ -1.43
HOXA9P31269 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXA9P31269 AL078595.2-201ENST00000605309 1780 ntBASIC6.09□□□□□ -1.43
HOXA9P31269 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HOXA9P31269 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXA9P31269 GAPDHP42-201ENST00000406848 981 ntBASIC6.09□□□□□ -1.43
HOXA9P31269 AC116036.1-201ENST00000412199 367 ntBASIC6.09□□□□□ -1.43
HOXA9P31269 AP000534.2-201ENST00000412729 568 ntBASIC6.09□□□□□ -1.43
HOXA9P31269 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXA9P31269 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXA9P31269 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXA9P31269 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXA9P31269 AC007386.1-201ENST00000455212 582 ntBASIC6.09□□□□□ -1.43
HOXA9P31269 RN7SL583P-201ENST00000475692 287 ntBASIC6.09□□□□□ -1.43
HOXA9P31269 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXA9P31269 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXA9P31269 AC074255.1-201ENST00000511259 501 ntBASIC6.09□□□□□ -1.43
HOXA9P31269 RN7SKP248-201ENST00000516278 305 ntBASIC6.09□□□□□ -1.43
HOXA9P31269 AC021678.3-201ENST00000517893 476 ntBASIC6.09□□□□□ -1.43
HOXA9P31269 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXA9P31269 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXA9P31269 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXA9P31269 AC211433.2-201ENST00000608433 387 ntBASIC6.09□□□□□ -1.43
HOXA9P31269 AC007204.2-201ENST00000615022 616 ntBASIC6.09□□□□□ -1.43
HOXA9P31269 AL355974.3-201ENST00000617383 467 ntBASIC6.09□□□□□ -1.43
HOXA9P31269 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HOXA9P31269 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXA9P31269 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXA9P31269 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXA9P31269 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXA9P31269 ZNF402P-201ENST00000404435 3100 ntBASIC6.09□□□□□ -1.43
HOXA9P31269 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.44
HOXA9P31269 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.09□□□□□ -1.44
HOXA9P31269 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
HOXA9P31269 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA9P31269 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA9P31269 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXA9P31269 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA9P31269 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms