Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.31□□□□□ -1.4
CASP1P29466 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.31□□□□□ -1.4
CASP1P29466 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.31□□□□□ -1.4
CASP1P29466 RPS17P15-201ENST00000475609 349 ntBASIC6.31□□□□□ -1.4
CASP1P29466 RPS17P5-201ENST00000498293 408 ntBASIC6.31□□□□□ -1.4
CASP1P29466 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CASP1P29466 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.31□□□□□ -1.4
CASP1P29466 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.31□□□□□ -1.4
CASP1P29466 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.31□□□□□ -1.4
CASP1P29466 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.31□□□□□ -1.4
CASP1P29466 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.31□□□□□ -1.4
CASP1P29466 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.31□□□□□ -1.4
CASP1P29466 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.31□□□□□ -1.4
CASP1P29466 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.31□□□□□ -1.4
CASP1P29466 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.31□□□□□ -1.4
CASP1P29466 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.31□□□□□ -1.4
CASP1P29466 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.31□□□□□ -1.4
CASP1P29466 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
CASP1P29466 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.31□□□□□ -1.4
CASP1P29466 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
CASP1P29466 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
CASP1P29466 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CASP1P29466 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
CASP1P29466 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.31□□□□□ -1.4
CASP1P29466 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.31□□□□□ -1.4
CASP1P29466 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CASP1P29466 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CASP1P29466 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CASP1P29466 AC084782.1-201ENST00000564401 2465 ntBASIC6.31□□□□□ -1.4
CASP1P29466 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.3□□□□□ -1.4
CASP1P29466 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CASP1P29466 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CASP1P29466 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CASP1P29466 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CASP1P29466 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.3□□□□□ -1.4
CASP1P29466 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CASP1P29466 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CASP1P29466 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CASP1P29466 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CASP1P29466 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CASP1P29466 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
CASP1P29466 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.3□□□□□ -1.4
CASP1P29466 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.3□□□□□ -1.4
CASP1P29466 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.3□□□□□ -1.4
CASP1P29466 MTND2P40-201ENST00000436718 841 ntBASIC6.3□□□□□ -1.4
CASP1P29466 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.3□□□□□ -1.4
CASP1P29466 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CASP1P29466 RN7SL570P-201ENST00000484405 292 ntBASIC6.3□□□□□ -1.4
CASP1P29466 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.3□□□□□ -1.4
CASP1P29466 AC111000.6-201ENST00000514471 709 ntBASIC6.3□□□□□ -1.4
CASP1P29466 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.3□□□□□ -1.4
CASP1P29466 AC060775.1-201ENST00000518241 520 ntBASIC6.3□□□□□ -1.4
CASP1P29466 AP000648.1-201ENST00000529682 397 ntBASIC6.3□□□□□ -1.4
CASP1P29466 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.3□□□□□ -1.4
CASP1P29466 AC067773.1-201ENST00000603284 1094 ntBASIC6.3□□□□□ -1.4
CASP1P29466 AL031601.1-201ENST00000605702 394 ntBASIC6.3□□□□□ -1.4
CASP1P29466 AL365181.4-201ENST00000609800 547 ntBASIC6.3□□□□□ -1.4
CASP1P29466 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.3□□□□□ -1.4
CASP1P29466 AC129915.3-201ENST00000634128 948 ntBASIC6.3□□□□□ -1.4
CASP1P29466 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CASP1P29466 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.3□□□□□ -1.4
CASP1P29466 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CASP1P29466 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CASP1P29466 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
CASP1P29466 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CASP1P29466 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CASP1P29466 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CASP1P29466 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CASP1P29466 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CASP1P29466 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CASP1P29466 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.29□□□□□ -1.4
CASP1P29466 SRRM1P3-201ENST00000426911 2678 ntBASIC6.29□□□□□ -1.4
CASP1P29466 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.29□□□□□ -1.4
CASP1P29466 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CASP1P29466 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
CASP1P29466 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CASP1P29466 RNA5SP453-201ENST00000362503 119 ntBASIC6.29□□□□□ -1.4
CASP1P29466 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.29□□□□□ -1.4
CASP1P29466 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CASP1P29466 AC068138.1-201ENST00000412635 217 ntBASIC6.29□□□□□ -1.4
CASP1P29466 AL035660.1-201ENST00000422041 222 ntBASIC6.29□□□□□ -1.4
CASP1P29466 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.29□□□□□ -1.4
CASP1P29466 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.29□□□□□ -1.4
CASP1P29466 AC138761.5-201ENST00000433967 325 ntBASIC6.29□□□□□ -1.4
CASP1P29466 AC019084.1-201ENST00000457337 432 ntBASIC6.29□□□□□ -1.4
CASP1P29466 ACA64.1-201ENST00000459171 127 ntBASIC6.29□□□□□ -1.4
CASP1P29466 AC074255.1-201ENST00000511259 501 ntBASIC6.29□□□□□ -1.4
CASP1P29466 OR8Q1P-201ENST00000526467 655 ntBASIC6.29□□□□□ -1.4
CASP1P29466 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.29□□□□□ -1.4
CASP1P29466 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.29□□□□□ -1.4
CASP1P29466 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.29□□□□□ -1.4
CASP1P29466 AL049840.6-202ENST00000603373 279 ntBASIC6.29□□□□□ -1.4
CASP1P29466 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.29□□□□□ -1.4
CASP1P29466 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CASP1P29466 AL355488.2-201ENST00000609909 2850 ntBASIC6.29□□□□□ -1.4
CASP1P29466 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CASP1P29466 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
CASP1P29466 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CASP1P29466 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CASP1P29466 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms