Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC7.42□□□□□ -1.22
COL5A2P05997 RPS29P22-201ENST00000472363 168 ntBASIC7.42□□□□□ -1.22
COL5A2P05997 AC083982.1-201ENST00000485679 344 ntBASIC7.42□□□□□ -1.22
COL5A2P05997 AC007686.1-201ENST00000488511 463 ntBASIC7.42□□□□□ -1.22
COL5A2P05997 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC7.42□□□□□ -1.22
COL5A2P05997 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.42□□□□□ -1.22
COL5A2P05997 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC7.42□□□□□ -1.22
COL5A2P05997 RPL10P14-201ENST00000565265 298 ntBASIC7.42□□□□□ -1.22
COL5A2P05997 AC087783.2-201ENST00000605070 562 ntBASIC7.42□□□□□ -1.22
COL5A2P05997 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC7.42□□□□□ -1.22
COL5A2P05997 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL5A2P05997 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL5A2P05997 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
COL5A2P05997 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
COL5A2P05997 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.41□□□□□ -1.22
COL5A2P05997 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL5A2P05997 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
COL5A2P05997 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.41□□□□□ -1.22
COL5A2P05997 AL359195.2-201ENST00000623657 4412 ntBASIC7.41□□□□□ -1.22
COL5A2P05997 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL5A2P05997 MRRF-207ENST00000373729 870 ntTSL 3 BASIC7.41□□□□□ -1.22
COL5A2P05997 AL360271.1-201ENST00000395679 510 ntBASIC7.41□□□□□ -1.22
COL5A2P05997 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7.41□□□□□ -1.22
COL5A2P05997 FAR2P2-201ENST00000413041 594 ntBASIC7.41□□□□□ -1.22
COL5A2P05997 RPL26P29-201ENST00000415623 438 ntBASIC7.41□□□□□ -1.22
COL5A2P05997 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.41□□□□□ -1.22
COL5A2P05997 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.41□□□□□ -1.22
COL5A2P05997 FAR2P4-202ENST00000425399 584 ntBASIC7.41□□□□□ -1.22
COL5A2P05997 AC092017.2-201ENST00000427600 362 ntBASIC7.41□□□□□ -1.22
COL5A2P05997 FAM96AP1-201ENST00000430879 482 ntBASIC7.41□□□□□ -1.22
COL5A2P05997 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL5A2P05997 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC7.41□□□□□ -1.22
COL5A2P05997 AC090142.2-201ENST00000483263 416 ntBASIC7.41□□□□□ -1.22
COL5A2P05997 MAL2-208ENST00000523307 556 ntTSL 4 BASIC7.41□□□□□ -1.22
COL5A2P05997 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC7.41□□□□□ -1.22
COL5A2P05997 AC127381.1-201ENST00000555979 939 ntBASIC7.41□□□□□ -1.22
COL5A2P05997 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC7.41□□□□□ -1.22
COL5A2P05997 MIR4330-201ENST00000579077 105 ntBASIC7.41□□□□□ -1.22
COL5A2P05997 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
COL5A2P05997 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
COL5A2P05997 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC7.41□□□□□ -1.22
COL5A2P05997 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC7.41□□□□□ -1.22
COL5A2P05997 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC7.41□□□□□ -1.22
COL5A2P05997 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.41□□□□□ -1.22
COL5A2P05997 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.41□□□□□ -1.22
COL5A2P05997 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
COL5A2P05997 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL5A2P05997 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL5A2P05997 AC002090.1-201ENST00000625000 2138 ntBASIC7.41□□□□□ -1.22
COL5A2P05997 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL5A2P05997 AC010401.2-201ENST00000575137 4934 ntBASIC7.4□□□□□ -1.22
COL5A2P05997 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL5A2P05997 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
COL5A2P05997 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL5A2P05997 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL5A2P05997 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
COL5A2P05997 SNORD8-201ENST00000363915 110 ntBASIC7.4□□□□□ -1.22
COL5A2P05997 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
COL5A2P05997 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC7.4□□□□□ -1.22
COL5A2P05997 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL5A2P05997 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.4□□□□□ -1.22
COL5A2P05997 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.4□□□□□ -1.22
COL5A2P05997 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC7.4□□□□□ -1.22
COL5A2P05997 OR51K1P-201ENST00000510214 950 ntBASIC7.4□□□□□ -1.22
COL5A2P05997 OR5AZ1P-201ENST00000527448 943 ntBASIC7.4□□□□□ -1.22
COL5A2P05997 AC139697.1-201ENST00000548429 745 ntBASIC7.4□□□□□ -1.22
COL5A2P05997 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC7.4□□□□□ -1.22
COL5A2P05997 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC7.4□□□□□ -1.22
COL5A2P05997 uc_338.18-201ENST00000615451 175 ntBASIC7.4□□□□□ -1.22
COL5A2P05997 CYP4F35P-202ENST00000636121 390 ntBASIC7.4□□□□□ -1.22
COL5A2P05997 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL5A2P05997 AP004607.3-201ENST00000530354 3915 ntBASIC7.4□□□□□ -1.22
COL5A2P05997 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
COL5A2P05997 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
COL5A2P05997 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
COL5A2P05997 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
COL5A2P05997 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
COL5A2P05997 AC114947.2-201ENST00000565748 2125 ntBASIC7.4□□□□□ -1.23
COL5A2P05997 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
COL5A2P05997 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC7.39□□□□□ -1.23
COL5A2P05997 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL5A2P05997 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.39□□□□□ -1.23
COL5A2P05997 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL5A2P05997 RNU4-4P-201ENST00000364588 130 ntBASIC7.39□□□□□ -1.23
COL5A2P05997 RNU1-43P-201ENST00000365052 165 ntBASIC7.39□□□□□ -1.23
COL5A2P05997 RNU1-149P-201ENST00000390870 161 ntBASIC7.39□□□□□ -1.23
COL5A2P05997 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL5A2P05997 AC007568.1-201ENST00000422912 471 ntBASIC7.39□□□□□ -1.23
COL5A2P05997 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL5A2P05997 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC7.39□□□□□ -1.23
COL5A2P05997 RPS11P7-201ENST00000442125 465 ntBASIC7.39□□□□□ -1.23
COL5A2P05997 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC7.39□□□□□ -1.23
COL5A2P05997 RPS3AP41-201ENST00000462701 778 ntBASIC7.39□□□□□ -1.23
COL5A2P05997 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL5A2P05997 AC093890.1-201ENST00000502554 540 ntBASIC7.39□□□□□ -1.23
COL5A2P05997 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC7.39□□□□□ -1.23
COL5A2P05997 HMGB1P40-201ENST00000525121 540 ntBASIC7.39□□□□□ -1.23
COL5A2P05997 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.39□□□□□ -1.23
COL5A2P05997 AL121594.2-201ENST00000541658 472 ntBASIC7.39□□□□□ -1.23
COL5A2P05997 GSTP1P1-201ENST00000548078 319 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms