Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC7.15□□□□□ -1.26
PDGFAP04085 Z97055.1-201ENST00000419730 712 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 AL009174.1-201ENST00000426577 416 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC7.15□□□□□ -1.26
PDGFAP04085 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC7.15□□□□□ -1.26
PDGFAP04085 LARP1BP3-201ENST00000437229 869 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 AC016908.1-201ENST00000442571 1219 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC7.15□□□□□ -1.26
PDGFAP04085 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC7.15□□□□□ -1.26
PDGFAP04085 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PDGFAP04085 AC013429.1-201ENST00000456604 422 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 OR7E62P-201ENST00000456741 477 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.15□□□□□ -1.26
PDGFAP04085 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PDGFAP04085 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC7.15□□□□□ -1.26
PDGFAP04085 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC7.15□□□□□ -1.26
PDGFAP04085 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.15□□□□□ -1.26
PDGFAP04085 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC7.15□□□□□ -1.26
PDGFAP04085 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.15□□□□□ -1.26
PDGFAP04085 AC116348.1-201ENST00000562525 528 ntTSL 3 BASIC7.15□□□□□ -1.26
PDGFAP04085 DNM1P31-201ENST00000564149 696 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC7.15□□□□□ -1.26
PDGFAP04085 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.15□□□□□ -1.26
PDGFAP04085 EIF4A1P9-201ENST00000576035 1207 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC7.15□□□□□ -1.26
PDGFAP04085 AC024614.1-201ENST00000577546 307 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 SYPL1P2-201ENST00000582878 727 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.15□□□□□ -1.26
PDGFAP04085 AC012065.4-201ENST00000602445 679 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 AC012065.3-201ENST00000602736 439 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 AL136985.2-201ENST00000607372 535 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 IGKV1OR1-1-201ENST00000613775 347 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 AC104985.2-201ENST00000620598 500 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 AC007347.2-201ENST00000623044 180 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 AL356596.1-201ENST00000624230 379 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 FKBP1AP4-201ENST00000631775 336 ntBASIC7.15□□□□□ -1.26
PDGFAP04085 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDGFAP04085 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDGFAP04085 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDGFAP04085 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDGFAP04085 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PDGFAP04085 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC7.15□□□□□ -1.27
PDGFAP04085 PABPC1P9-201ENST00000426076 1612 ntBASIC7.15□□□□□ -1.27
PDGFAP04085 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
PDGFAP04085 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC7.15□□□□□ -1.27
PDGFAP04085 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PDGFAP04085 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.15□□□□□ -1.27
PDGFAP04085 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.14□□□□□ -1.27
PDGFAP04085 AL080317.3-201ENST00000607434 4315 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
PDGFAP04085 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.14□□□□□ -1.27
PDGFAP04085 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 Y_RNA.303-201ENST00000364998 94 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 Y_RNA.390-201ENST00000383932 102 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 RNU6-98P-201ENST00000384173 107 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 SNORD15A-201ENST00000384214 148 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 AC003071.2-201ENST00000423857 315 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC7.14□□□□□ -1.27
PDGFAP04085 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.14□□□□□ -1.27
PDGFAP04085 SNX18P14-201ENST00000429308 574 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC7.14□□□□□ -1.27
PDGFAP04085 AC069154.1-201ENST00000432914 542 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC7.14□□□□□ -1.27
PDGFAP04085 DNAJC19P4-201ENST00000440115 345 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 GCNT1P5-201ENST00000449274 682 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.14□□□□□ -1.27
PDGFAP04085 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.14□□□□□ -1.27
PDGFAP04085 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC7.14□□□□□ -1.27
PDGFAP04085 AC093325.1-201ENST00000508378 326 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.14□□□□□ -1.27
PDGFAP04085 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.14□□□□□ -1.27
PDGFAP04085 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.14□□□□□ -1.27
PDGFAP04085 RN7SKP31-201ENST00000516354 278 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC7.14□□□□□ -1.27
PDGFAP04085 AC100823.2-201ENST00000518337 699 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 AP002453.2-201ENST00000533503 320 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC7.14□□□□□ -1.27
PDGFAP04085 GTF2IP22-201ENST00000554443 182 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC7.14□□□□□ -1.27
PDGFAP04085 AC010132.4-201ENST00000569883 1368 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
PDGFAP04085 MIR4528-201ENST00000577763 90 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 BPTFP1-201ENST00000579209 492 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 RN7SL14P-201ENST00000579715 298 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 SNORD39.2-201ENST00000579995 76 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms