Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.01□□□□□ -1.45
PDGFBP01127 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.01□□□□□ -1.45
PDGFBP01127 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFBP01127 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.01□□□□□ -1.45
PDGFBP01127 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.01□□□□□ -1.45
PDGFBP01127 AC087763.1-201ENST00000603391 286 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.01□□□□□ -1.45
PDGFBP01127 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.01□□□□□ -1.45
PDGFBP01127 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFBP01127 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.01□□□□□ -1.45
PDGFBP01127 AC123912.3-201ENST00000600907 1367 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFBP01127 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.01□□□□□ -1.45
PDGFBP01127 AC025809.2-201ENST00000625085 1802 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFBP01127 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFBP01127 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PDGFBP01127 AP001541.1-201ENST00000623322 1904 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFBP01127 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.01□□□□□ -1.45
PDGFBP01127 AC093909.5-201ENST00000621839 1799 ntBASIC6.01□□□□□ -1.45
PDGFBP01127 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6□□□□□ -1.45
PDGFBP01127 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFBP01127 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFBP01127 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6□□□□□ -1.45
PDGFBP01127 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6□□□□□ -1.45
PDGFBP01127 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PDGFBP01127 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDGFBP01127 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDGFBP01127 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6□□□□□ -1.45
PDGFBP01127 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFBP01127 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFBP01127 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDGFBP01127 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDGFBP01127 OR10R3P-201ENST00000361688 942 ntBASIC6□□□□□ -1.45
PDGFBP01127 MIR433-201ENST00000384837 93 ntBASIC6□□□□□ -1.45
PDGFBP01127 AL589647.1-201ENST00000402485 466 ntBASIC6□□□□□ -1.45
PDGFBP01127 GABARAPL3-201ENST00000412799 354 ntBASIC6□□□□□ -1.45
PDGFBP01127 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6□□□□□ -1.45
PDGFBP01127 NMD3P2-201ENST00000421815 761 ntBASIC6□□□□□ -1.45
PDGFBP01127 SRSF1P1-201ENST00000424058 520 ntBASIC6□□□□□ -1.45
PDGFBP01127 MORF4L1P5-201ENST00000433352 961 ntBASIC6□□□□□ -1.45
PDGFBP01127 AL445928.1-201ENST00000435545 222 ntBASIC6□□□□□ -1.45
PDGFBP01127 AC245047.2-201ENST00000441060 530 ntBASIC6□□□□□ -1.45
PDGFBP01127 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6□□□□□ -1.45
PDGFBP01127 AL606490.8-201ENST00000441624 319 ntBASIC6□□□□□ -1.45
PDGFBP01127 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6□□□□□ -1.45
PDGFBP01127 FAR2P1-206ENST00000449736 709 ntBASIC6□□□□□ -1.45
PDGFBP01127 AC002075.1-201ENST00000457396 676 ntBASIC6□□□□□ -1.45
PDGFBP01127 RPS17P15-201ENST00000475609 349 ntBASIC6□□□□□ -1.45
PDGFBP01127 RPL7P39-201ENST00000481157 744 ntBASIC6□□□□□ -1.45
PDGFBP01127 AC093267.1-201ENST00000489176 961 ntBASIC6□□□□□ -1.45
PDGFBP01127 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6□□□□□ -1.45
PDGFBP01127 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6□□□□□ -1.45
PDGFBP01127 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6□□□□□ -1.45
PDGFBP01127 EIF4EP5-201ENST00000528228 640 ntBASIC6□□□□□ -1.45
PDGFBP01127 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6□□□□□ -1.45
PDGFBP01127 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDGFBP01127 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6□□□□□ -1.45
PDGFBP01127 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6□□□□□ -1.45
PDGFBP01127 AC015720.2-201ENST00000567709 334 ntBASIC6□□□□□ -1.45
PDGFBP01127 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6□□□□□ -1.45
PDGFBP01127 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6□□□□□ -1.45
PDGFBP01127 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDGFBP01127 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6□□□□□ -1.45
PDGFBP01127 AC020765.1-201ENST00000604296 328 ntBASIC6□□□□□ -1.45
PDGFBP01127 IGLCOR22-2-201ENST00000605398 313 ntBASIC6□□□□□ -1.45
PDGFBP01127 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDGFBP01127 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6□□□□□ -1.45
PDGFBP01127 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6□□□□□ -1.45
PDGFBP01127 OR11H2-202ENST00000641517 1085 ntBASIC6□□□□□ -1.45
PDGFBP01127 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6□□□□□ -1.45
PDGFBP01127 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6□□□□□ -1.45
PDGFBP01127 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFBP01127 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFBP01127 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
PDGFBP01127 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFBP01127 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDGFBP01127 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6□□□□□ -1.45
PDGFBP01127 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6□□□□□ -1.45
PDGFBP01127 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6□□□□□ -1.45
PDGFBP01127 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFBP01127 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFBP01127 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.99□□□□□ -1.45
PDGFBP01127 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
PDGFBP01127 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFBP01127 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFBP01127 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFBP01127 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFBP01127 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFBP01127 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFBP01127 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PDGFBP01127 AC127070.3-201ENST00000503695 3263 ntBASIC5.99□□□□□ -1.45
PDGFBP01127 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFBP01127 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PDGFBP01127 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFBP01127 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFBP01127 OR2M1P-201ENST00000318104 951 ntBASIC5.99□□□□□ -1.45
PDGFBP01127 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFBP01127 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms