Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 COX6B1P4-201ENST00000519826 484 ntBASIC6.29□□□□□ -1.4
TRIM38O00635 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM38O00635 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.29□□□□□ -1.4
TRIM38O00635 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.29□□□□□ -1.4
TRIM38O00635 TPRX1P1-201ENST00000557620 319 ntBASIC6.29□□□□□ -1.4
TRIM38O00635 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM38O00635 AC008507.2-201ENST00000588402 1176 ntBASIC6.29□□□□□ -1.4
TRIM38O00635 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM38O00635 AC011458.1-201ENST00000604034 617 ntBASIC6.29□□□□□ -1.4
TRIM38O00635 U1.25-201ENST00000614085 162 ntBASIC6.29□□□□□ -1.4
TRIM38O00635 U1.31-201ENST00000620022 160 ntBASIC6.29□□□□□ -1.4
TRIM38O00635 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM38O00635 AP001264.1-201ENST00000620602 703 ntBASIC6.29□□□□□ -1.4
TRIM38O00635 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM38O00635 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM38O00635 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
TRIM38O00635 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM38O00635 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM38O00635 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM38O00635 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM38O00635 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
TRIM38O00635 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM38O00635 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM38O00635 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM38O00635 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM38O00635 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM38O00635 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM38O00635 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM38O00635 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM38O00635 RN7SKP78-201ENST00000364711 318 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 AC005522.1-201ENST00000395416 346 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM38O00635 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM38O00635 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM38O00635 IPPKP1-201ENST00000422501 768 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 CYCSP52-201ENST00000422857 310 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM38O00635 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM38O00635 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM38O00635 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM38O00635 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM38O00635 XKRY2-201ENST00000442362 1093 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 AC245517.2-201ENST00000442890 346 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM38O00635 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM38O00635 OR9N1P-202ENST00000494289 481 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 OR7E99P-201ENST00000505750 922 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM38O00635 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM38O00635 AC112206.4-201ENST00000515142 405 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 IGLVIV-64-201ENST00000518581 301 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 IGKV3D-34-201ENST00000522638 302 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM38O00635 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
TRIM38O00635 NANOGNBP2-201ENST00000544753 553 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.28□□□□□ -1.4
TRIM38O00635 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.28□□□□□ -1.4
TRIM38O00635 CYCSP38-201ENST00000559840 322 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM38O00635 MRPS21P8-201ENST00000569196 235 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 AC126365.2-201ENST00000580630 379 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM38O00635 MIR4701-201ENST00000583094 63 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM38O00635 AC090330.1-201ENST00000588646 764 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM38O00635 BUB1P1-201ENST00000603541 607 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 AL080312.2-201ENST00000613001 630 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
TRIM38O00635 AC253576.2-201ENST00000618815 580 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 AC026124.2-201ENST00000621847 656 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 SNX18P12-201ENST00000624821 759 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM38O00635 MTND5P23-201ENST00000430812 1655 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
TRIM38O00635 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
TRIM38O00635 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM38O00635 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM38O00635 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
TRIM38O00635 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM38O00635 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM38O00635 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM38O00635 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM38O00635 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM38O00635 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM38O00635 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
TRIM38O00635 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM38O00635 AL353743.3-201ENST00000442109 1468 ntBASIC6.28□□□□□ -1.4
TRIM38O00635 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
TRIM38O00635 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM38O00635 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.27□□□□□ -1.41
TRIM38O00635 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM38O00635 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM38O00635 AC093225.1-201ENST00000506867 1408 ntBASIC6.27□□□□□ -1.41
TRIM38O00635 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TRIM38O00635 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM38O00635 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM38O00635 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM38O00635 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TRIM38O00635 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 688.5 ms