Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AC016583.1-201ENST00000624221 2431 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AL662795.2-201ENST00000624252 3706 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 COX6B1P3-201ENST00000312310 260 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 RNA5SP375-201ENST00000362975 119 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 MYL6P5-201ENST00000412707 459 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AL096829.1-201ENST00000413677 457 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AC069154.1-201ENST00000432914 542 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 HMGB3P10-201ENST00000434734 572 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 TUBB4BP6-201ENST00000437576 479 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 RN7SL170P-201ENST00000487098 295 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 MTCO3P42-201ENST00000509488 518 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 MTCO3P39-201ENST00000514812 518 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AP001804.1-201ENST00000526868 919 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 OR4A6P-201ENST00000534364 970 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 RPA2P1-201ENST00000556557 721 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AC008507.3-201ENST00000585753 472 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AC090236.2-201ENST00000587933 1101 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AC073333.2-201ENST00000603589 769 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AC004801.6-201ENST00000616571 978 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AC096861.1-201ENST00000616652 240 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 MTCO1P1-201ENST00000624263 1081 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 AC114876.1-201ENST00000490962 1366 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 CREM-203ENST00000344351 1625 ntTSL 2 BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 TTC39DP-201ENST00000416781 1688 ntBASIC4.34□□□□□ -1.71
LYRM9A8MSI8 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LYRM9A8MSI8 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LYRM9A8MSI8 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
LYRM9A8MSI8 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 THAP12P9-201ENST00000503971 2360 ntBASIC4.33□□□□□ -1.72
LYRM9A8MSI8 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 QRSL1P1-201ENST00000400977 1540 ntBASIC4.33□□□□□ -1.72
LYRM9A8MSI8 RBMY1HP-201ENST00000382759 1389 ntBASIC4.33□□□□□ -1.72
LYRM9A8MSI8 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 OR10R3P-201ENST00000361688 942 ntBASIC4.33□□□□□ -1.72
LYRM9A8MSI8 SNORA51.9-201ENST00000384295 124 ntBASIC4.33□□□□□ -1.72
LYRM9A8MSI8 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 RPL24P2-201ENST00000421023 475 ntBASIC4.33□□□□□ -1.72
LYRM9A8MSI8 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.33□□□□□ -1.72
LYRM9A8MSI8 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 AC007679.3-201ENST00000434035 414 ntBASIC4.33□□□□□ -1.72
LYRM9A8MSI8 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LYRM9A8MSI8 UBE2V2P1-201ENST00000434717 398 ntBASIC4.33□□□□□ -1.72
LYRM9A8MSI8 PNKDP1-201ENST00000435914 430 ntBASIC4.33□□□□□ -1.72
LYRM9A8MSI8 AL353662.1-201ENST00000439099 327 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms