Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RCCD1A6NED2 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RCCD1A6NED2 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC8.41□□□□□ -1.06
RCCD1A6NED2 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RCCD1A6NED2 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.41□□□□□ -1.06
RCCD1A6NED2 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
RCCD1A6NED2 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RCCD1A6NED2 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
RCCD1A6NED2 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RCCD1A6NED2 AC021242.1-201ENST00000507315 2035 ntBASIC8.41□□□□□ -1.06
RCCD1A6NED2 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RCCD1A6NED2 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RCCD1A6NED2 MTND5P16-201ENST00000460269 1703 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RCCD1A6NED2 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
RCCD1A6NED2 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RCCD1A6NED2 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RCCD1A6NED2 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RCCD1A6NED2 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RCCD1A6NED2 CDR1-202ENST00000625883 1485 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RCCD1A6NED2 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RCCD1A6NED2 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RCCD1A6NED2 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
RCCD1A6NED2 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
RCCD1A6NED2 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RCCD1A6NED2 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 OR2M1P-201ENST00000318104 951 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 AL731537.1-201ENST00000343087 421 ntTSL 3 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 RNU6-462P-201ENST00000362659 105 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
RCCD1A6NED2 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RCCD1A6NED2 U8.14-201ENST00000390843 143 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 VIM2P-201ENST00000402383 1294 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 NIP7P3-201ENST00000404319 515 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 GSTA10P-201ENST00000412182 576 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 GAPDHP49-201ENST00000421421 961 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 GAPDHP51-201ENST00000426454 1000 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 KRTAP9-11P-201ENST00000431013 525 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 Z98747.1-201ENST00000438791 356 ntTSL 3 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 AL109945.1-201ENST00000448134 687 ntTSL 2 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 AC112206.1-201ENST00000468416 477 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 RPL5P15-201ENST00000475870 897 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 RN7SL333P-201ENST00000476398 297 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 AC099521.1-201ENST00000482557 334 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 AC093278.1-201ENST00000494700 600 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 AC008799.1-201ENST00000495909 457 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 KCTD9P2-201ENST00000512203 1013 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 TRMT10BP1-201ENST00000519377 943 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 HNRNPA1P38-201ENST00000523612 957 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 PPP1R1AP1-201ENST00000525622 425 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 AP001189.2-201ENST00000527320 189 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 BRD9P1-201ENST00000529855 560 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 AC006206.2-201ENST00000537192 992 ntTSL 4 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 AC120498.4-201ENST00000561649 320 ntTSL 3 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 RN7SL353P-201ENST00000579902 252 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 AC011840.5-201ENST00000582125 771 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 SNX29P2-204ENST00000603801 875 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 AC090948.2-201ENST00000607363 564 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 AL355974.3-201ENST00000617383 467 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 PISRT1-201ENST00000626175 531 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 U6.107-201ENST00000637108 79 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 AC183089.2-201ENST00000637931 916 ntBASIC8.4□□□□□ -1.06
RCCD1A6NED2 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RCCD1A6NED2 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.4□□□□□ -1.06
RCCD1A6NED2 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
RCCD1A6NED2 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.4□□□□□ -1.07
RCCD1A6NED2 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC8.4□□□□□ -1.07
RCCD1A6NED2 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
RCCD1A6NED2 OR2A3P-202ENST00000641249 1776 ntBASIC8.4□□□□□ -1.07
RCCD1A6NED2 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.07
RCCD1A6NED2 MARK2P4-201ENST00000503381 2380 ntBASIC8.4□□□□□ -1.07
RCCD1A6NED2 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
RCCD1A6NED2 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms