Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 CCAT2-201ENST00000630920 1752 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AL354854.1-201ENST00000455940 1363 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AL353625.1-202ENST00000366273 571 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 RN7SKP146-201ENST00000410242 334 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 GTF3AP1-201ENST00000416942 1004 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 Z82198.3-201ENST00000421145 199 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AC073464.3-201ENST00000422564 712 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AC242426.1-201ENST00000435270 960 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 TRIM60P16-201ENST00000444048 694 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AC104629.1-201ENST00000494226 508 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AC112484.3-201ENST00000505910 329 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AC005000.1-201ENST00000536192 288 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 MTND2P17-201ENST00000550281 688 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AC027281.1-201ENST00000574178 758 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AL359742.1-201ENST00000622497 540 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AL357140.4-201ENST00000636827 412 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AC087565.3-202ENST00000642085 1603 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AP001002.1-201ENST00000625148 1513 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 AC010401.2-201ENST00000575137 4934 ntBASIC5.98□□□□□ -1.45
TCRBV7S3A2A0A539 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 SELENOWP1-201ENST00000322792 252 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 SNORA27.3-201ENST00000364937 134 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 RNA5SP91-201ENST00000390902 119 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 CCNB2P1-201ENST00000399411 1150 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AMZ2P2-201ENST00000406819 1057 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AL354890.1-201ENST00000413730 346 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 METTL15P3-201ENST00000415522 1221 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 CRIP1P1-201ENST00000427567 185 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 UBE2V1P6-201ENST00000430840 422 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AL356121.1-201ENST00000442911 156 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AC015908.1-201ENST00000478739 476 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 MAST4-IT1-201ENST00000514241 658 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 MRPS5P3-201ENST00000515577 166 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 RN7SKP35-201ENST00000517210 151 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 DNAJC19P3-201ENST00000594491 331 ntBASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TCRBV7S3A2A0A539 AL513327.3-201ENST00000602618 469 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms