Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CASC19-261ENST00000641853 1638 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 ZNF733P-202ENST00000444809 1573 ntBASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.12□□□□□ -1.27
COL4A3BPQ9Y5P4 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 Z93929.1-201ENST00000418200 1475 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 AC110373.1-201ENST00000505994 3505 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 SNORD16-201ENST00000362803 99 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 RNU1-65P-201ENST00000363919 148 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 MIR188-201ENST00000385034 86 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 SNORA11.5-201ENST00000408163 128 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 XKRYP4-201ENST00000414395 483 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 AL157884.1-201ENST00000424561 454 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 GAPDHP59-201ENST00000435908 267 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 AL355355.1-201ENST00000442900 793 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 XKRYP5-201ENST00000449659 483 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 PPM1AP1-201ENST00000502740 1135 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 AC018797.1-201ENST00000510791 255 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 AC010374.2-201ENST00000512933 535 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 RNA5SP441-201ENST00000516809 88 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 RNU6-1308P-201ENST00000516817 103 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 TPRX1P1-201ENST00000557620 319 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 AC005632.2-201ENST00000564271 828 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 AC124283.4-201ENST00000581815 456 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 AC233702.7-202ENST00000582941 211 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 AL135999.3-201ENST00000610501 812 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 uc_338.31-201ENST00000615595 186 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 MIR6721-201ENST00000617181 87 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 MIR6811-201ENST00000620409 58 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 AC093875.1-201ENST00000623688 504 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 CASC19-274ENST00000642018 970 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 TMCC1P1-201ENST00000518897 1980 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 TMEM161BP1-201ENST00000457388 1457 ntBASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
COL4A3BPQ9Y5P4 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 AC008432.1-201ENST00000615912 1320 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 ATP5HP3-201ENST00000396994 486 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 U3.43-201ENST00000410734 213 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 EMC3-AS1-205ENST00000438698 534 ntBASIC7.1□□□□□ -1.27
COL4A3BPQ9Y5P4 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms