Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC135803.1-201ENST00000608748 565 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AL136520.1-201ENST00000600311 1322 ntBASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSX2IPQ9Y2D8 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AC020656.2-201ENST00000613291 5309 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AC017078.1-201ENST00000416146 368 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AL354692.1-201ENST00000423044 315 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 OR5W1P-201ENST00000423705 938 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 UBE2V1P6-201ENST00000430840 422 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 NPM1P48-201ENST00000436002 853 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 RPL23AP19-201ENST00000436229 369 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 TRIM60P16-201ENST00000444048 694 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 RN7SL165P-201ENST00000477476 291 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AC015908.1-201ENST00000478739 476 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 SNORA58-201ENST00000505219 137 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AC021146.10-201ENST00000515628 706 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AC011270.1-201ENST00000558606 583 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AC011445.2-201ENST00000599274 173 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AC073333.2-201ENST00000603589 769 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AC100767.2-201ENST00000604840 693 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 RFPL4AP6-201ENST00000616792 846 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AC008147.4-201ENST00000617570 1204 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AC006511.3-201ENST00000624929 1783 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 AC018717.1-201ENST00000457712 1505 ntBASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
SSX2IPQ9Y2D8 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 AL078595.2-201ENST00000605309 1780 ntBASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 RNU1-49P-201ENST00000363468 159 ntBASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 AL512504.1-201ENST00000415494 778 ntBASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 SFR1P2-201ENST00000421841 730 ntBASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 RPS7P14-201ENST00000426405 583 ntBASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 AC023141.3-201ENST00000436698 278 ntBASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 RPL31P15-201ENST00000449770 338 ntBASIC6.65□□□□□ -1.34
SSX2IPQ9Y2D8 VPS25P1-201ENST00000455691 508 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms