Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 AC006116.1-201ENST00000587908 2171 ntBASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PDZRN3Q9UPQ7 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PDZRN3Q9UPQ7 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PDZRN3Q9UPQ7 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
PDZRN3Q9UPQ7 IARS-205ENST00000443024 4341 ntTSL 5 BASIC9.21□□□□□ -0.93
PDZRN3Q9UPQ7 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC9.21□□□□□ -0.93
PDZRN3Q9UPQ7 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PDZRN3Q9UPQ7 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 SNORA27.3-201ENST00000364937 134 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 SNORD51.1-201ENST00000365405 77 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 MT-TD-201ENST00000387419 68 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 ATP5F1P3-201ENST00000397213 657 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 RPS3AP37-201ENST00000419176 745 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AL672212.1-201ENST00000422246 400 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 OR4F13P-201ENST00000428478 931 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 ARF4P4-201ENST00000439608 520 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 HMGN1P32-201ENST00000441744 256 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC133965.1-201ENST00000452984 354 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 RPS20P24-201ENST00000457473 361 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 CREM-220ENST00000463314 964 ntTSL 2 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 RN7SL655P-201ENST00000486087 298 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 RN7SL350P-201ENST00000492591 299 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC010374.1-201ENST00000503762 1237 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC095052.1-201ENST00000509955 863 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC093752.1-206ENST00000511823 336 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 PTP4A1P4-201ENST00000512479 322 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 RN7SKP34-201ENST00000516142 244 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 RN7SKP244-201ENST00000516513 307 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 RNU4-18P-201ENST00000516751 149 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 CARSP2-201ENST00000520688 277 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 IGHVIII-25-1-201ENST00000522143 241 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 OR7E154P-201ENST00000525174 932 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 HIGD1AP10-201ENST00000527837 282 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AP003072.1-201ENST00000531740 145 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AL121839.1-201ENST00000556233 1185 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC103968.1-201ENST00000557841 573 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 NMNAT1P5-201ENST00000559657 841 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC105275.2-201ENST00000567907 711 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC007151.1-201ENST00000572774 483 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 RPS27AP19-201ENST00000597285 458 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC103792.1-201ENST00000603591 919 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AL365503.1-201ENST00000605247 905 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC015819.1-201ENST00000613588 663 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC022743.1-201ENST00000624990 664 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AL356585.10-201ENST00000641883 123 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AC023632.6-201ENST00000624338 2177 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 OFD1P9Y-201ENST00000417699 1491 ntBASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDZRN3Q9UPQ7 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 PARN-201ENST00000341484 2100 ntTSL 2 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 MRPS17P1-201ENST00000596009 3130 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 RNU6-839P-201ENST00000363347 108 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 RNU6-354P-201ENST00000383862 107 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 RNU6-610P-201ENST00000384264 107 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 RAB5CP1-201ENST00000395972 580 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 HMGB3P19-201ENST00000403971 560 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 FAT1P1-201ENST00000406588 507 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 RNU2-66P-201ENST00000410650 161 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AL161631.1-201ENST00000417933 486 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 EEF1GP7-201ENST00000422983 703 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms