Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP2Q96SN8 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP2Q96SN8 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.67□□□□□ -1.34
CDK5RAP2Q96SN8 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP2Q96SN8 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP2Q96SN8 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP2Q96SN8 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP2Q96SN8 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP2Q96SN8 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CDK5RAP2Q96SN8 LPP-208ENST00000448637 5835 ntTSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP2Q96SN8 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 RN7SKP279-201ENST00000411383 298 ntBASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 RPS26P38-201ENST00000414476 348 ntBASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 AC108075.1-201ENST00000424692 529 ntBASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 OSTCP1-201ENST00000455507 450 ntBASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 AC027667.1-201ENST00000545814 304 ntBASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 MIR4700-201ENST00000578311 74 ntBASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 CYP4F35P-202ENST00000636121 390 ntBASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 RN7SKP160-201ENST00000363804 340 ntBASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 RNU1-77P-201ENST00000390868 162 ntBASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 AC099521.1-201ENST00000482557 334 ntBASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 RPS7P6-201ENST00000485777 579 ntBASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 AC015864.1-201ENST00000496512 544 ntBASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 AC137627.1-201ENST00000545761 289 ntBASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 AL133481.2-203ENST00000607558 139 ntBASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 CASC19-222ENST00000641321 1173 ntBASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP2Q96SN8 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 OR4K12P-201ENST00000406538 961 ntBASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 LDHAP2-201ENST00000437325 985 ntBASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 AC005297.1-201ENST00000444765 862 ntBASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 MYO5BP2-201ENST00000449815 1277 ntBASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 SBDSP1-204ENST00000453858 737 ntBASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 RPS4XP1-201ENST00000482189 787 ntBASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 AC008953.1-201ENST00000497334 318 ntBASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 ST13P12-201ENST00000508958 1094 ntBASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 MIR2117-201ENST00000516780 80 ntBASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 BNIP3P32-201ENST00000600015 554 ntBASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 AL136295.6-201ENST00000610486 658 ntBASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 AC132068.1-201ENST00000623805 459 ntBASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
CDK5RAP2Q96SN8 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.65□□□□□ -1.35
CDK5RAP2Q96SN8 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
CDK5RAP2Q96SN8 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
CDK5RAP2Q96SN8 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
CDK5RAP2Q96SN8 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
CDK5RAP2Q96SN8 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
CDK5RAP2Q96SN8 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.65□□□□□ -1.35
CDK5RAP2Q96SN8 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CDK5RAP2Q96SN8 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CDK5RAP2Q96SN8 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.64□□□□□ -1.35
CDK5RAP2Q96SN8 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CDK5RAP2Q96SN8 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.64□□□□□ -1.35
CDK5RAP2Q96SN8 RNA5SP335-201ENST00000363817 110 ntBASIC6.64□□□□□ -1.35
CDK5RAP2Q96SN8 SNORD56.6-201ENST00000384569 71 ntBASIC6.64□□□□□ -1.35
CDK5RAP2Q96SN8 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.64□□□□□ -1.35
CDK5RAP2Q96SN8 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.64□□□□□ -1.35
CDK5RAP2Q96SN8 DSTNP5-201ENST00000427921 523 ntBASIC6.64□□□□□ -1.35
CDK5RAP2Q96SN8 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP2Q96SN8 OR2AO1P-201ENST00000476497 403 ntBASIC6.64□□□□□ -1.35
CDK5RAP2Q96SN8 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.64□□□□□ -1.35
CDK5RAP2Q96SN8 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP2Q96SN8 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms