Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 ZFYVE26-201ENST00000347230 9675 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRKDCP78527 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.92□□□□□ -1.78
PRKDCP78527 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
PRKDCP78527 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC3.91□□□□□ -1.78
PRKDCP78527 TACR1-201ENST00000305249 4959 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC3.91□□□□□ -1.78
PRKDCP78527 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
PRKDCP78527 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 DBIP1-201ENST00000401435 260 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 RPS3AP23-201ENST00000401762 784 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.91□□□□□ -1.78
PRKDCP78527 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC3.91□□□□□ -1.78
PRKDCP78527 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 AL590399.4-201ENST00000436561 601 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.91□□□□□ -1.78
PRKDCP78527 SCARNA13-201ENST00000516672 275 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 IGKV1-32-201ENST00000519290 311 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 AC023575.1-201ENST00000580510 358 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 AC011944.2-201ENST00000624440 683 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
PRKDCP78527 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC3.91□□□□□ -1.78
PRKDCP78527 LGALS8-212ENST00000450372 6281 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
PRKDCP78527 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC3.91□□□□□ -1.78
PRKDCP78527 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
PRKDCP78527 CACNA1D-202ENST00000350061 7636 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PRKDCP78527 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC3.91□□□□□ -1.78
PRKDCP78527 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PRKDCP78527 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
PRKDCP78527 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 GAPDHP15-201ENST00000398586 975 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 CASKP1-201ENST00000412870 582 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.91□□□□□ -1.78
PRKDCP78527 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC3.91□□□□□ -1.78
PRKDCP78527 AL358232.1-201ENST00000448030 501 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 RPL7P32-201ENST00000457119 744 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 RPS23P2-201ENST00000463671 415 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.91□□□□□ -1.78
PRKDCP78527 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.91□□□□□ -1.78
PRKDCP78527 AC024589.2-201ENST00000605642 1294 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC3.91□□□□□ -1.78
PRKDCP78527 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC3.91□□□□□ -1.78
PRKDCP78527 BTAF1-201ENST00000265990 7250 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 MADD-202ENST00000342922 6005 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
PRKDCP78527 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PRKDCP78527 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
PRKDCP78527 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC3.91□□□□□ -1.78
PRKDCP78527 AFF1-202ENST00000395146 9285 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
PRKDCP78527 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PRKDCP78527 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PRKDCP78527 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 RNA5SP447-201ENST00000363749 119 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 AL445189.1-201ENST00000405722 338 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 RPL21P108-201ENST00000413857 481 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 AL158073.1-201ENST00000426848 1104 ntBASIC3.91□□□□□ -1.78
PRKDCP78527 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.91□□□□□ -1.78
PRKDCP78527 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.91□□□□□ -1.78
PRKDCP78527 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.91□□□□□ -1.78
PRKDCP78527 LAMA3-201ENST00000269217 5671 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
PRKDCP78527 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 DHX8-201ENST00000262415 5558 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKDCP78527 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC3.91□□□□□ -1.78
PRKDCP78527 AL133243.4-201ENST00000623116 3109 ntBASIC3.9□□□□□ -1.78
PRKDCP78527 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PRKDCP78527 THSD7A-202ENST00000423059 10663 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
PRKDCP78527 PIK3C2B-202ENST00000367187 7686 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PRKDCP78527 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PRKDCP78527 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
PRKDCP78527 MIR1182-201ENST00000408363 97 ntBASIC3.9□□□□□ -1.78
PRKDCP78527 ATG4AP1-201ENST00000416893 538 ntBASIC3.9□□□□□ -1.78
PRKDCP78527 HSPD1P12-201ENST00000429127 1069 ntBASIC3.9□□□□□ -1.78
PRKDCP78527 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.9□□□□□ -1.78
PRKDCP78527 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.9□□□□□ -1.78
PRKDCP78527 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms