Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC009704.2-201ENST00000618739 483 ntBASIC4.16□□□□□ -1.74
CKS1BP61024 MIR6732-201ENST00000619365 60 ntBASIC4.16□□□□□ -1.74
CKS1BP61024 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.16□□□□□ -1.74
CKS1BP61024 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.16□□□□□ -1.74
CKS1BP61024 MAPK10-350ENST00000641777 965 ntBASIC4.16□□□□□ -1.74
CKS1BP61024 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CKS1BP61024 LINC01109-201ENST00000603837 3081 ntBASIC4.16□□□□□ -1.74
CKS1BP61024 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CKS1BP61024 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CKS1BP61024 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CKS1BP61024 AC093535.2-201ENST00000624769 2326 ntBASIC4.16□□□□□ -1.74
CKS1BP61024 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.16□□□□□ -1.74
CKS1BP61024 MTND5P23-201ENST00000430812 1655 ntBASIC4.16□□□□□ -1.74
CKS1BP61024 OR14L1P-202ENST00000641545 3009 ntBASIC4.16□□□□□ -1.74
CKS1BP61024 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.16□□□□□ -1.74
CKS1BP61024 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.15□□□□□ -1.74
CKS1BP61024 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC4.15□□□□□ -1.74
CKS1BP61024 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC4.15□□□□□ -1.74
CKS1BP61024 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.15□□□□□ -1.74
CKS1BP61024 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.15□□□□□ -1.74
CKS1BP61024 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.74
CKS1BP61024 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CKS1BP61024 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.15□□□□□ -1.74
CKS1BP61024 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CKS1BP61024 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CKS1BP61024 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.15□□□□□ -1.74
CKS1BP61024 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC4.15□□□□□ -1.74
CKS1BP61024 VN2R3P-201ENST00000422626 1412 ntBASIC4.15□□□□□ -1.74
CKS1BP61024 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CKS1BP61024 AC005702.3-201ENST00000585345 1447 ntBASIC4.15□□□□□ -1.74
CKS1BP61024 AL450326.2-201ENST00000421913 1962 ntBASIC4.15□□□□□ -1.74
CKS1BP61024 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
CKS1BP61024 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CKS1BP61024 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CKS1BP61024 Y_RNA.209-201ENST00000364156 111 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 RN7SKP191-201ENST00000364713 306 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.15□□□□□ -1.75
CKS1BP61024 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CKS1BP61024 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CKS1BP61024 RNU6-729P-201ENST00000384399 107 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CKS1BP61024 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CKS1BP61024 AL590635.1-201ENST00000406314 586 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC4.15□□□□□ -1.75
CKS1BP61024 MICG-208ENST00000416822 132 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.15□□□□□ -1.75
CKS1BP61024 AC104843.2-201ENST00000427666 297 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 IGLV3-4-201ENST00000432300 244 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.15□□□□□ -1.75
CKS1BP61024 AC019185.3-201ENST00000438805 323 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC4.15□□□□□ -1.75
CKS1BP61024 RPS10P14-201ENST00000440748 502 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 AC245291.3-201ENST00000443400 292 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 RPS7P4-201ENST00000444127 582 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 PTMAP3-201ENST00000447474 330 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC4.15□□□□□ -1.75
CKS1BP61024 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.15□□□□□ -1.75
CKS1BP61024 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC4.15□□□□□ -1.75
CKS1BP61024 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC4.15□□□□□ -1.75
CKS1BP61024 AC124945.1-201ENST00000485133 188 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 PFN2-213ENST00000494827 793 ntTSL 4 BASIC4.15□□□□□ -1.75
CKS1BP61024 AC113430.1-201ENST00000506872 718 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.15□□□□□ -1.75
CKS1BP61024 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CKS1BP61024 IGKV1D-32-201ENST00000517449 318 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC4.15□□□□□ -1.75
CKS1BP61024 AC008429.4-201ENST00000521201 182 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC4.15□□□□□ -1.75
CKS1BP61024 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC4.15□□□□□ -1.75
CKS1BP61024 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.15□□□□□ -1.75
CKS1BP61024 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CKS1BP61024 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.15□□□□□ -1.75
CKS1BP61024 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC4.15□□□□□ -1.75
CKS1BP61024 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC4.15□□□□□ -1.75
CKS1BP61024 AC089984.3-201ENST00000552838 363 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC4.15□□□□□ -1.75
CKS1BP61024 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC4.15□□□□□ -1.75
CKS1BP61024 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
CKS1BP61024 MIR4258-201ENST00000580920 91 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 NPIPB1P-202ENST00000588786 828 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.15□□□□□ -1.75
CKS1BP61024 AC004805.3-201ENST00000603178 310 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC4.15□□□□□ -1.75
CKS1BP61024 AC103564.3-201ENST00000621194 220 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 RAB28P4-201ENST00000622233 665 ntBASIC4.15□□□□□ -1.75
CKS1BP61024 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC4.15□□□□□ -1.75
CKS1BP61024 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CKS1BP61024 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.15□□□□□ -1.75
CKS1BP61024 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CKS1BP61024 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CKS1BP61024 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CKS1BP61024 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.15□□□□□ -1.75
CKS1BP61024 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.15□□□□□ -1.75
CKS1BP61024 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CKS1BP61024 HDAC1P2-201ENST00000453661 1398 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CKS1BP61024 RPL31P11-201ENST00000426558 1558 ntBASIC4.14□□□□□ -1.75
CKS1BP61024 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CKS1BP61024 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms