Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.56□□□□□ -1.52
CLDN20P56880 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN20P56880 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.56□□□□□ -1.52
CLDN20P56880 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.56□□□□□ -1.52
CLDN20P56880 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLDN20P56880 RAB5CP1-201ENST00000395972 580 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 OR7E156P-201ENST00000400303 464 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 SNORA11.5-201ENST00000408163 128 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 AC017019.1-201ENST00000426129 261 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 FAR1P1-201ENST00000427163 934 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 PNKDP1-201ENST00000435914 430 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 AC023141.3-201ENST00000436698 278 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN20P56880 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN20P56880 AMYP1-201ENST00000440059 1023 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 AL606490.8-201ENST00000441624 319 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN20P56880 RPS27AP3-201ENST00000453803 454 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.56□□□□□ -1.52
CLDN20P56880 AC090958.1-201ENST00000511122 351 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.56□□□□□ -1.52
CLDN20P56880 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN20P56880 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.56□□□□□ -1.52
CLDN20P56880 OR5D2P-201ENST00000524390 911 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 AC021269.1-201ENST00000526860 705 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 AC005363.1-201ENST00000530779 351 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.56□□□□□ -1.52
CLDN20P56880 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN20P56880 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN20P56880 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN20P56880 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN20P56880 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.56□□□□□ -1.52
CLDN20P56880 AC090079.2-201ENST00000575289 768 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN20P56880 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN20P56880 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN20P56880 FAM27E2-201ENST00000619668 403 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 AP002371.2-201ENST00000624450 503 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.56□□□□□ -1.52
CLDN20P56880 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CLDN20P56880 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CLDN20P56880 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN20P56880 AC011416.1-201ENST00000514947 1732 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN20P56880 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN20P56880 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN20P56880 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CLDN20P56880 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CLDN20P56880 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN20P56880 CAP1P2-201ENST00000417455 1409 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN20P56880 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN20P56880 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN20P56880 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.56□□□□□ -1.52
CLDN20P56880 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN20P56880 AC024651.2-201ENST00000562480 2098 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 AL354854.1-201ENST00000455940 1363 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN20P56880 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN20P56880 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN20P56880 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
CLDN20P56880 SNORA21-201ENST00000362423 132 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 SNORA51.9-201ENST00000384295 124 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 U3.23-201ENST00000391132 200 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 RNA5SP156-201ENST00000410250 110 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 EEF1B2P8-201ENST00000414101 671 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.55□□□□□ -1.52
CLDN20P56880 AL354766.1-201ENST00000423396 542 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 AL390879.2-203ENST00000426943 1121 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.55□□□□□ -1.52
CLDN20P56880 AL353662.1-201ENST00000439099 327 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 AL138899.2-201ENST00000439139 499 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN20P56880 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 AC002553.3-201ENST00000453002 341 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 RPL7L1P3-201ENST00000455249 689 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.55□□□□□ -1.52
CLDN20P56880 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.55□□□□□ -1.52
CLDN20P56880 AC073594.1-201ENST00000462065 364 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 AC135999.1-201ENST00000478962 479 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 OR9N1P-201ENST00000491296 333 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.55□□□□□ -1.52
CLDN20P56880 RNU6-760P-201ENST00000516078 97 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 OR10D4P-201ENST00000525892 951 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.55□□□□□ -1.52
CLDN20P56880 RPA2P3-201ENST00000533268 770 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 AC006518.1-201ENST00000541449 943 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN20P56880 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.55□□□□□ -1.52
CLDN20P56880 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN20P56880 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.55□□□□□ -1.52
CLDN20P56880 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.55□□□□□ -1.52
CLDN20P56880 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.55□□□□□ -1.52
CLDN20P56880 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN20P56880 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN20P56880 NPIPB1P-202ENST00000588786 828 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN20P56880 AC008555.7-201ENST00000605008 583 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms