Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 OR7E101P-201ENST00000400428 513 ntBASIC5.3□□□□□ -1.56
CLDN18P56856 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN18P56856 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN18P56856 MTND6P12-201ENST00000428247 522 ntBASIC5.3□□□□□ -1.56
CLDN18P56856 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.3□□□□□ -1.56
CLDN18P56856 MTND6P5-201ENST00000448266 512 ntBASIC5.3□□□□□ -1.56
CLDN18P56856 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CLDN18P56856 UBFD1P1-201ENST00000473259 814 ntBASIC5.3□□□□□ -1.56
CLDN18P56856 GAPDHP71-201ENST00000511530 1003 ntBASIC5.3□□□□□ -1.56
CLDN18P56856 AC008429.4-201ENST00000521201 182 ntBASIC5.3□□□□□ -1.56
CLDN18P56856 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.3□□□□□ -1.56
CLDN18P56856 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN18P56856 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CLDN18P56856 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN18P56856 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN18P56856 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN18P56856 TXNP4-201ENST00000575018 310 ntBASIC5.3□□□□□ -1.56
CLDN18P56856 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN18P56856 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN18P56856 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN18P56856 AL139099.4-201ENST00000614802 114 ntBASIC5.3□□□□□ -1.56
CLDN18P56856 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN18P56856 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN18P56856 AC026124.2-201ENST00000621847 656 ntBASIC5.3□□□□□ -1.56
CLDN18P56856 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN18P56856 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CLDN18P56856 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN18P56856 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN18P56856 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN18P56856 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN18P56856 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CLDN18P56856 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN18P56856 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN18P56856 AC232271.1-201ENST00000602455 2715 ntBASIC5.3□□□□□ -1.56
CLDN18P56856 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN18P56856 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLDN18P56856 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN18P56856 NEPNP-201ENST00000404786 1371 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN18P56856 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDN18P56856 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN18P56856 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN18P56856 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN18P56856 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN18P56856 ZNF101P1-201ENST00000435701 1720 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 TET1P1-201ENST00000426627 2301 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN18P56856 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN18P56856 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
CLDN18P56856 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN18P56856 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLDN18P56856 RN7SKP292-201ENST00000365522 317 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDN18P56856 RPS3AP2-201ENST00000407190 754 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN18P56856 EEF1B2P8-201ENST00000414101 671 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 CDY17P-201ENST00000414121 1282 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDN18P56856 AC013268.2-201ENST00000420753 337 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 MRPS21P2-201ENST00000424704 264 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.29□□□□□ -1.56
CLDN18P56856 AC104843.2-201ENST00000427666 297 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 AC126120.1-201ENST00000431082 470 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDN18P56856 AL663074.2-201ENST00000440621 479 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.29□□□□□ -1.56
CLDN18P56856 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN18P56856 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN18P56856 AC093166.4-201ENST00000457867 318 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN18P56856 IGKV3D-34-201ENST00000522638 302 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.29□□□□□ -1.56
CLDN18P56856 HMGN2P36-201ENST00000529541 409 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN18P56856 AC079600.1-201ENST00000550326 297 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 AC091078.2-201ENST00000557145 559 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.29□□□□□ -1.56
CLDN18P56856 GARSP1-201ENST00000570895 719 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN18P56856 FAM27E4-201ENST00000605259 342 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.29□□□□□ -1.56
CLDN18P56856 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.29□□□□□ -1.56
CLDN18P56856 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CLDN18P56856 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN18P56856 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CLDN18P56856 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN18P56856 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN18P56856 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDN18P56856 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDN18P56856 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN18P56856 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLDN18P56856 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN18P56856 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CLDN18P56856 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN18P56856 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CLDN18P56856 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN18P56856 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN18P56856 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
CLDN18P56856 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms