Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 SNRPGP1-201ENST00000553864 222 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.32□□□□□ -1.4
HDAC4P56524 AC002519.2-203ENST00000567043 837 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 AC007346.1-201ENST00000569208 867 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 AC007448.1-201ENST00000582714 234 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HDAC4P56524 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.32□□□□□ -1.4
HDAC4P56524 AC119403.2-201ENST00000590960 598 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.32□□□□□ -1.4
HDAC4P56524 AC068768.2-201ENST00000602352 343 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.32□□□□□ -1.4
HDAC4P56524 MIR6806-201ENST00000622141 64 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 AL118508.4-201ENST00000624142 1176 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 AL357562.1-201ENST00000624911 609 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HDAC4P56524 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HDAC4P56524 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HDAC4P56524 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HDAC4P56524 AL121839.2-201ENST00000565058 6943 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC4P56524 RBMY1HP-201ENST00000382759 1389 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 AC087516.1-201ENST00000561236 2428 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC4P56524 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.31□□□□□ -1.4
HDAC4P56524 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.31□□□□□ -1.4
HDAC4P56524 AC004656.1-201ENST00000568479 4951 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC4P56524 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC4P56524 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HDAC4P56524 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HDAC4P56524 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC4P56524 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.31□□□□□ -1.4
HDAC4P56524 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HDAC4P56524 RNU1-59P-201ENST00000364829 162 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC4P56524 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
HDAC4P56524 AC005522.1-201ENST00000395416 346 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 RPS7P8-201ENST00000418311 581 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.31□□□□□ -1.4
HDAC4P56524 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.31□□□□□ -1.4
HDAC4P56524 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.31□□□□□ -1.4
HDAC4P56524 AL353662.1-201ENST00000439099 327 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
HDAC4P56524 FTLP8-201ENST00000446770 267 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.31□□□□□ -1.4
HDAC4P56524 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.31□□□□□ -1.4
HDAC4P56524 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.31□□□□□ -1.4
HDAC4P56524 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.31□□□□□ -1.4
HDAC4P56524 RN7SKP35-201ENST00000517210 151 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 IGKV3D-25-201ENST00000519599 235 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.31□□□□□ -1.4
HDAC4P56524 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.31□□□□□ -1.4
HDAC4P56524 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.31□□□□□ -1.4
HDAC4P56524 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.31□□□□□ -1.4
HDAC4P56524 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC4P56524 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.31□□□□□ -1.4
HDAC4P56524 MIR3154-201ENST00000577829 84 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 AC005229.3-201ENST00000603438 323 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 AL645933.2-201ENST00000606743 1207 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.31□□□□□ -1.4
HDAC4P56524 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.31□□□□□ -1.4
HDAC4P56524 U1.25-201ENST00000614085 162 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 AL354696.1-201ENST00000614652 497 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 U1.34-201ENST00000618578 162 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 FAM27E2-201ENST00000619668 403 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 U1.31-201ENST00000620022 160 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 AL683826.1-201ENST00000624104 627 ntBASIC6.31□□□□□ -1.4
HDAC4P56524 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC4P56524 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC4P56524 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC4P56524 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC4P56524 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
HDAC4P56524 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.31□□□□□ -1.4
HDAC4P56524 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.31□□□□□ -1.4
HDAC4P56524 AP005435.3-201ENST00000531260 3198 ntBASIC6.3□□□□□ -1.4
HDAC4P56524 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.3□□□□□ -1.4
HDAC4P56524 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.3□□□□□ -1.4
HDAC4P56524 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.3□□□□□ -1.4
HDAC4P56524 AC006484.1-201ENST00000435086 1884 ntBASIC6.3□□□□□ -1.4
HDAC4P56524 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HDAC4P56524 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC4P56524 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC4P56524 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC4P56524 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC4P56524 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC4P56524 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC4P56524 MSL3P1-202ENST00000440028 1468 ntBASIC6.3□□□□□ -1.4
HDAC4P56524 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.3□□□□□ -1.4
HDAC4P56524 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.3□□□□□ -1.4
HDAC4P56524 OR5T3-201ENST00000303059 1023 ntBASIC6.3□□□□□ -1.4
HDAC4P56524 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC4P56524 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HDAC4P56524 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.3□□□□□ -1.4
HDAC4P56524 RN7SKP166-201ENST00000410812 305 ntBASIC6.3□□□□□ -1.4
HDAC4P56524 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.3□□□□□ -1.4
HDAC4P56524 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.3□□□□□ -1.4
HDAC4P56524 PNKDP1-201ENST00000435914 430 ntBASIC6.3□□□□□ -1.4
HDAC4P56524 AC097463.1-201ENST00000447288 481 ntBASIC6.3□□□□□ -1.4
HDAC4P56524 AC016027.4-201ENST00000450866 277 ntBASIC6.3□□□□□ -1.4
HDAC4P56524 MTND2P3-201ENST00000452458 470 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms