Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CSNK1A1P48729 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.23□□□□□ -1.57
CSNK1A1P48729 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
CSNK1A1P48729 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CSNK1A1P48729 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CSNK1A1P48729 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CSNK1A1P48729 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CSNK1A1P48729 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CSNK1A1P48729 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 TET1P1-201ENST00000426627 2301 ntBASIC5.22□□□□□ -1.57
CSNK1A1P48729 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 AC020633.1-201ENST00000468439 2247 ntBASIC5.22□□□□□ -1.57
CSNK1A1P48729 RNFT1P3-201ENST00000340898 1052 ntBASIC5.22□□□□□ -1.57
CSNK1A1P48729 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CSNK1A1P48729 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 AC092651.1-201ENST00000426110 312 ntBASIC5.22□□□□□ -1.57
CSNK1A1P48729 RPL12P16-201ENST00000431098 498 ntBASIC5.22□□□□□ -1.57
CSNK1A1P48729 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.22□□□□□ -1.57
CSNK1A1P48729 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 AC023141.8-201ENST00000442554 208 ntBASIC5.22□□□□□ -1.57
CSNK1A1P48729 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 SNRPCP3-201ENST00000474888 476 ntBASIC5.22□□□□□ -1.57
CSNK1A1P48729 AP002884.1-201ENST00000479691 655 ntBASIC5.22□□□□□ -1.57
CSNK1A1P48729 AC099521.1-201ENST00000482557 334 ntBASIC5.22□□□□□ -1.57
CSNK1A1P48729 RN7SL170P-201ENST00000487098 295 ntBASIC5.22□□□□□ -1.57
CSNK1A1P48729 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 LSM3P4-201ENST00000502948 309 ntBASIC5.22□□□□□ -1.57
CSNK1A1P48729 ASNSP4-201ENST00000511103 447 ntBASIC5.22□□□□□ -1.57
CSNK1A1P48729 RNA5SP340-201ENST00000517132 107 ntBASIC5.22□□□□□ -1.57
CSNK1A1P48729 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 AC145423.1-201ENST00000605712 336 ntBASIC5.22□□□□□ -1.57
CSNK1A1P48729 AC108673.3-201ENST00000609183 335 ntBASIC5.22□□□□□ -1.57
CSNK1A1P48729 MIR6809-201ENST00000612189 116 ntBASIC5.22□□□□□ -1.57
CSNK1A1P48729 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CSNK1A1P48729 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CSNK1A1P48729 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CSNK1A1P48729 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CSNK1A1P48729 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CSNK1A1P48729 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CSNK1A1P48729 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
CSNK1A1P48729 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CSNK1A1P48729 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CSNK1A1P48729 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CSNK1A1P48729 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CSNK1A1P48729 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CSNK1A1P48729 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CSNK1A1P48729 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CSNK1A1P48729 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CSNK1A1P48729 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CSNK1A1P48729 AC125336.1-201ENST00000508893 2827 ntBASIC5.21□□□□□ -1.57
CSNK1A1P48729 AC027088.4-201ENST00000611559 1947 ntBASIC5.21□□□□□ -1.57
CSNK1A1P48729 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CSNK1A1P48729 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CSNK1A1P48729 AC005261.6-201ENST00000623072 1387 ntBASIC5.21□□□□□ -1.58
CSNK1A1P48729 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
CSNK1A1P48729 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CSNK1A1P48729 AL096711.1-201ENST00000404780 554 ntBASIC5.21□□□□□ -1.58
CSNK1A1P48729 DEFA9P-201ENST00000433042 285 ntBASIC5.21□□□□□ -1.58
CSNK1A1P48729 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.21□□□□□ -1.58
CSNK1A1P48729 USP24P1-201ENST00000433802 779 ntBASIC5.21□□□□□ -1.58
CSNK1A1P48729 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CSNK1A1P48729 RPS12P17-201ENST00000438591 377 ntBASIC5.21□□□□□ -1.58
CSNK1A1P48729 AL161722.1-201ENST00000446972 1032 ntBASIC5.21□□□□□ -1.58
CSNK1A1P48729 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.21□□□□□ -1.58
CSNK1A1P48729 CST12P-201ENST00000457644 362 ntBASIC5.21□□□□□ -1.58
CSNK1A1P48729 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.21□□□□□ -1.58
CSNK1A1P48729 AC135999.1-201ENST00000478962 479 ntBASIC5.21□□□□□ -1.58
CSNK1A1P48729 GAPDHP71-201ENST00000511530 1003 ntBASIC5.21□□□□□ -1.58
CSNK1A1P48729 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.21□□□□□ -1.58
CSNK1A1P48729 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.21□□□□□ -1.58
CSNK1A1P48729 AC079905.1-201ENST00000549280 475 ntBASIC5.21□□□□□ -1.58
CSNK1A1P48729 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.21□□□□□ -1.58
CSNK1A1P48729 NPM1P42-201ENST00000560329 862 ntBASIC5.21□□□□□ -1.58
CSNK1A1P48729 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.21□□□□□ -1.58
CSNK1A1P48729 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.21□□□□□ -1.58
CSNK1A1P48729 AC006115.2-201ENST00000596823 202 ntBASIC5.21□□□□□ -1.58
CSNK1A1P48729 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.21□□□□□ -1.58
CSNK1A1P48729 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms