Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.22□□□□□ -1.41
PTPN9P43378 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.22□□□□□ -1.41
PTPN9P43378 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN9P43378 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN9P43378 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.22□□□□□ -1.41
PTPN9P43378 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.22□□□□□ -1.41
PTPN9P43378 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN9P43378 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN9P43378 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.22□□□□□ -1.41
PTPN9P43378 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
PTPN9P43378 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTPN9P43378 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.21□□□□□ -1.41
PTPN9P43378 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PTPN9P43378 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PTPN9P43378 AC140479.2-201ENST00000421567 3130 ntBASIC6.21□□□□□ -1.41
PTPN9P43378 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
PTPN9P43378 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
PTPN9P43378 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PTPN9P43378 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTPN9P43378 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.21□□□□□ -1.42
PTPN9P43378 SELENOWP1-201ENST00000322792 252 ntBASIC6.21□□□□□ -1.42
PTPN9P43378 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTPN9P43378 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.21□□□□□ -1.42
PTPN9P43378 AC245884.2-201ENST00000426257 404 ntBASIC6.21□□□□□ -1.42
PTPN9P43378 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.21□□□□□ -1.42
PTPN9P43378 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.21□□□□□ -1.42
PTPN9P43378 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
PTPN9P43378 AC073410.1-201ENST00000435125 589 ntBASIC6.21□□□□□ -1.42
PTPN9P43378 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.21□□□□□ -1.42
PTPN9P43378 REG1CP-206ENST00000447469 496 ntBASIC6.21□□□□□ -1.42
PTPN9P43378 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.21□□□□□ -1.42
PTPN9P43378 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.21□□□□□ -1.42
PTPN9P43378 AC068228.1-201ENST00000461723 211 ntBASIC6.21□□□□□ -1.42
PTPN9P43378 AL603882.1-201ENST00000463059 681 ntBASIC6.21□□□□□ -1.42
PTPN9P43378 AC023194.2-201ENST00000465398 406 ntBASIC6.21□□□□□ -1.42
PTPN9P43378 AC098847.1-201ENST00000473094 348 ntBASIC6.21□□□□□ -1.42
PTPN9P43378 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC6.21□□□□□ -1.42
PTPN9P43378 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.21□□□□□ -1.42
PTPN9P43378 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.21□□□□□ -1.42
PTPN9P43378 Vault.2-201ENST00000516519 98 ntBASIC6.21□□□□□ -1.42
PTPN9P43378 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.21□□□□□ -1.42
PTPN9P43378 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.21□□□□□ -1.42
PTPN9P43378 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.21□□□□□ -1.42
PTPN9P43378 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.21□□□□□ -1.42
PTPN9P43378 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC6.21□□□□□ -1.42
PTPN9P43378 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTPN9P43378 AC005244.1-201ENST00000582566 339 ntBASIC6.21□□□□□ -1.42
PTPN9P43378 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.21□□□□□ -1.42
PTPN9P43378 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.21□□□□□ -1.42
PTPN9P43378 AC008833.1-201ENST00000611633 691 ntBASIC6.21□□□□□ -1.42
PTPN9P43378 MIR7109-201ENST00000613748 65 ntBASIC6.21□□□□□ -1.42
PTPN9P43378 AC245014.3-201ENST00000618589 347 ntBASIC6.21□□□□□ -1.42
PTPN9P43378 AC080188.3-201ENST00000624842 748 ntBASIC6.21□□□□□ -1.42
PTPN9P43378 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTPN9P43378 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PTPN9P43378 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.21□□□□□ -1.42
PTPN9P43378 CASC19-238ENST00000641523 1558 ntBASIC6.21□□□□□ -1.42
PTPN9P43378 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTPN9P43378 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
PTPN9P43378 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTPN9P43378 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
PTPN9P43378 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTPN9P43378 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
PTPN9P43378 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTPN9P43378 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.21□□□□□ -1.42
PTPN9P43378 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.21□□□□□ -1.42
PTPN9P43378 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN9P43378 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN9P43378 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
PTPN9P43378 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PTPN9P43378 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN9P43378 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PTPN9P43378 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.2□□□□□ -1.42
PTPN9P43378 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN9P43378 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN9P43378 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN9P43378 SNORA40.4-201ENST00000390971 128 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PTPN9P43378 AC099535.1-201ENST00000408928 371 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.2□□□□□ -1.42
PTPN9P43378 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.2□□□□□ -1.42
PTPN9P43378 RPS4XP5-201ENST00000419038 768 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 RPS3AP38-201ENST00000435889 763 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN9P43378 AL663074.2-201ENST00000440621 479 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.2□□□□□ -1.42
PTPN9P43378 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.2□□□□□ -1.42
PTPN9P43378 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.2□□□□□ -1.42
PTPN9P43378 PFN1P6-201ENST00000476786 399 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 RPL38P3-201ENST00000484463 213 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 AP003396.4-201ENST00000527574 265 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.2□□□□□ -1.42
PTPN9P43378 AC024405.1-201ENST00000532521 1042 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.2□□□□□ -1.42
PTPN9P43378 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.2□□□□□ -1.42
PTPN9P43378 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTPN9P43378 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.2□□□□□ -1.42
PTPN9P43378 AC007956.1-201ENST00000555623 542 ntBASIC6.2□□□□□ -1.42
PTPN9P43378 AC107958.1-201ENST00000556576 290 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms