Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 WNK1-220ENST00000574564 1401 ntBASIC8.03□□□□□ -1.12
RFX1P22670 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 IARS-205ENST00000443024 4341 ntTSL 5 BASIC8.03□□□□□ -1.12
RFX1P22670 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 HCG18-244ENST00000602516 2890 ntBASIC8.03□□□□□ -1.12
RFX1P22670 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC8.03□□□□□ -1.12
RFX1P22670 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.03□□□□□ -1.12
RFX1P22670 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
RFX1P22670 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
RFX1P22670 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 AL078621.1-201ENST00000272567 768 ntBASIC8.03□□□□□ -1.12
RFX1P22670 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 RN7SKP174-201ENST00000363803 330 ntBASIC8.03□□□□□ -1.12
RFX1P22670 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 SNORD65.1-201ENST00000390889 71 ntBASIC8.03□□□□□ -1.12
RFX1P22670 AL132875.1-201ENST00000403623 949 ntBASIC8.03□□□□□ -1.12
RFX1P22670 AC023141.10-201ENST00000415634 200 ntBASIC8.03□□□□□ -1.12
RFX1P22670 IPPKP1-201ENST00000422501 768 ntBASIC8.03□□□□□ -1.12
RFX1P22670 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC8.03□□□□□ -1.12
RFX1P22670 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC8.03□□□□□ -1.12
RFX1P22670 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC8.03□□□□□ -1.12
RFX1P22670 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC8.03□□□□□ -1.12
RFX1P22670 SUMO2P2-201ENST00000456482 255 ntBASIC8.03□□□□□ -1.12
RFX1P22670 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC8.03□□□□□ -1.12
RFX1P22670 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC8.03□□□□□ -1.12
RFX1P22670 ACTG1P13-201ENST00000486987 1043 ntBASIC8.03□□□□□ -1.12
RFX1P22670 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC8.03□□□□□ -1.12
RFX1P22670 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC8.03□□□□□ -1.12
RFX1P22670 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 HSPE1P23-201ENST00000509838 286 ntBASIC8.03□□□□□ -1.12
RFX1P22670 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC8.03□□□□□ -1.12
RFX1P22670 IGKV2-29-201ENST00000521304 372 ntBASIC8.03□□□□□ -1.12
RFX1P22670 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC8.03□□□□□ -1.12
RFX1P22670 AP001124.1-201ENST00000529628 385 ntBASIC8.03□□□□□ -1.12
RFX1P22670 OR7E96P-201ENST00000530816 976 ntBASIC8.03□□□□□ -1.12
RFX1P22670 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC8.03□□□□□ -1.12
RFX1P22670 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC8.03□□□□□ -1.12
RFX1P22670 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC8.03□□□□□ -1.12
RFX1P22670 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC8.03□□□□□ -1.12
RFX1P22670 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC8.03□□□□□ -1.12
RFX1P22670 BMS1P15-201ENST00000554269 1141 ntBASIC8.03□□□□□ -1.12
RFX1P22670 FAM30C-201ENST00000561158 410 ntBASIC8.03□□□□□ -1.12
RFX1P22670 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC8.03□□□□□ -1.12
RFX1P22670 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC8.03□□□□□ -1.12
RFX1P22670 AC022146.1-201ENST00000595307 847 ntBASIC8.03□□□□□ -1.12
RFX1P22670 AC125494.2-201ENST00000602431 657 ntBASIC8.03□□□□□ -1.12
RFX1P22670 AC128687.1-201ENST00000605304 619 ntBASIC8.03□□□□□ -1.12
RFX1P22670 AC009283.1-201ENST00000615852 645 ntBASIC8.03□□□□□ -1.12
RFX1P22670 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.03□□□□□ -1.12
RFX1P22670 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC8.03□□□□□ -1.12
RFX1P22670 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
RFX1P22670 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.03□□□□□ -1.12
RFX1P22670 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
RFX1P22670 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
RFX1P22670 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC8.03□□□□□ -1.12
RFX1P22670 AL355974.1-201ENST00000618896 1708 ntBASIC8.03□□□□□ -1.12
RFX1P22670 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
RFX1P22670 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RFX1P22670 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC8.03□□□□□ -1.12
RFX1P22670 MTND4P31-201ENST00000425607 1343 ntBASIC8.03□□□□□ -1.12
RFX1P22670 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
RFX1P22670 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC8.02□□□□□ -1.12
RFX1P22670 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
RFX1P22670 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
RFX1P22670 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RFX1P22670 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
RFX1P22670 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
RFX1P22670 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC8.02□□□□□ -1.13
RFX1P22670 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RFX1P22670 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
RFX1P22670 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC8.02□□□□□ -1.13
RFX1P22670 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RFX1P22670 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RFX1P22670 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
RFX1P22670 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RFX1P22670 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RFX1P22670 Y_RNA.6-201ENST00000362350 114 ntBASIC8.02□□□□□ -1.13
RFX1P22670 U3.4-201ENST00000363352 213 ntBASIC8.02□□□□□ -1.13
RFX1P22670 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
RFX1P22670 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC8.02□□□□□ -1.13
RFX1P22670 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC8.02□□□□□ -1.13
RFX1P22670 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC8.02□□□□□ -1.13
RFX1P22670 FCF1P9-201ENST00000412546 282 ntBASIC8.02□□□□□ -1.13
RFX1P22670 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC8.02□□□□□ -1.13
RFX1P22670 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC8.02□□□□□ -1.13
RFX1P22670 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
RFX1P22670 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC8.02□□□□□ -1.13
RFX1P22670 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms