Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 COX4I1P1-201ENST00000554239 509 ntBASIC8.43□□□□□ -1.06
COL9A1P20849 SCOCP1-201ENST00000554676 349 ntBASIC8.43□□□□□ -1.06
COL9A1P20849 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC8.43□□□□□ -1.06
COL9A1P20849 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC8.43□□□□□ -1.06
COL9A1P20849 AC244034.2-201ENST00000562504 509 ntBASIC8.43□□□□□ -1.06
COL9A1P20849 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC8.43□□□□□ -1.06
COL9A1P20849 RN7SL66P-201ENST00000582099 264 ntBASIC8.43□□□□□ -1.06
COL9A1P20849 UBE2L4-201ENST00000587688 464 ntBASIC8.43□□□□□ -1.06
COL9A1P20849 POLR3GP2-201ENST00000588366 668 ntBASIC8.43□□□□□ -1.06
COL9A1P20849 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC8.43□□□□□ -1.06
COL9A1P20849 AC073534.1-201ENST00000598671 1056 ntBASIC8.43□□□□□ -1.06
COL9A1P20849 CKS1BP3-201ENST00000600888 237 ntBASIC8.43□□□□□ -1.06
COL9A1P20849 AP001330.4-201ENST00000604350 154 ntBASIC8.43□□□□□ -1.06
COL9A1P20849 AC006238.1-201ENST00000609787 534 ntBASIC8.43□□□□□ -1.06
COL9A1P20849 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC8.43□□□□□ -1.06
COL9A1P20849 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
COL9A1P20849 AC099654.6-201ENST00000636487 512 ntBASIC8.43□□□□□ -1.06
COL9A1P20849 AC016582.3-206ENST00000636547 207 ntBASIC8.43□□□□□ -1.06
COL9A1P20849 NELL1-203ENST00000357134 3022 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
COL9A1P20849 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
COL9A1P20849 MCTP1-202ENST00000429576 3159 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
COL9A1P20849 CHN2-211ENST00000424025 2279 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
COL9A1P20849 ENOX2-207ENST00000610637 2422 ntTSL 5 BASIC8.43□□□□□ -1.06
COL9A1P20849 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC8.43□□□□□ -1.06
COL9A1P20849 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
COL9A1P20849 PIEZO2-204ENST00000538948 2671 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
COL9A1P20849 AL139811.2-201ENST00000373465 1630 ntBASIC8.43□□□□□ -1.06
COL9A1P20849 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
COL9A1P20849 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
COL9A1P20849 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
COL9A1P20849 ARHGEF9-225ENST00000636276 4097 ntTSL 5 BASIC8.43□□□□□ -1.06
COL9A1P20849 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC8.43□□□□□ -1.06
COL9A1P20849 DDHD1-210ENST00000612692 12339 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
COL9A1P20849 SNCA-201ENST00000336904 3041 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
COL9A1P20849 ADGRF4-203ENST00000371220 3075 ntTSL 5 BASIC8.43□□□□□ -1.06
COL9A1P20849 SLC25A13-201ENST00000265631 3136 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
COL9A1P20849 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
COL9A1P20849 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
COL9A1P20849 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC8.42□□□□□ -1.06
COL9A1P20849 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL9A1P20849 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
COL9A1P20849 DHX29-201ENST00000251636 4502 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL9A1P20849 AC117529.1-201ENST00000505789 2023 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 BSN-201ENST00000296452 15955 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL9A1P20849 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL9A1P20849 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
COL9A1P20849 DYNLT1-202ENST00000367088 2891 ntTSL 2 BASIC8.42□□□□□ -1.06
COL9A1P20849 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
COL9A1P20849 PARD6G-AS1-202ENST00000586421 3333 ntTSL 2 BASIC8.42□□□□□ -1.06
COL9A1P20849 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL9A1P20849 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL9A1P20849 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
COL9A1P20849 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.42□□□□□ -1.06
COL9A1P20849 RNU6-1066P-201ENST00000363573 105 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 Y_RNA.197-201ENST00000364004 102 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC8.42□□□□□ -1.06
COL9A1P20849 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
COL9A1P20849 TMSB4XP8-201ENST00000402089 135 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 RPL7P58-201ENST00000402913 758 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC8.42□□□□□ -1.06
COL9A1P20849 TMSB4XP6-201ENST00000415187 135 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 RBM6-203ENST00000421682 684 ntTSL 2 BASIC8.42□□□□□ -1.06
COL9A1P20849 HCG25-217ENST00000422366 702 ntTSL 3 BASIC8.42□□□□□ -1.06
COL9A1P20849 TMSB4XP1-201ENST00000424567 135 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 NPM1P34-201ENST00000428821 893 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC8.42□□□□□ -1.06
COL9A1P20849 RPL14P5-201ENST00000436474 730 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 TBL1YP1-201ENST00000440297 1026 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 RPL12P49-201ENST00000441100 121 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 AL353093.1-201ENST00000441292 436 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 TCEA1P1-201ENST00000449716 880 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 VN1R38P-201ENST00000450265 887 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC8.42□□□□□ -1.06
COL9A1P20849 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.42□□□□□ -1.06
COL9A1P20849 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC8.42□□□□□ -1.06
COL9A1P20849 TAAR3P-201ENST00000466706 1078 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 AC010301.1-201ENST00000473936 355 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 TAAR3P-202ENST00000481759 1025 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC8.42□□□□□ -1.06
COL9A1P20849 KRT18P54-201ENST00000513396 748 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
COL9A1P20849 Vault.2-201ENST00000516519 98 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 RN7SKP256-201ENST00000517201 314 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC8.42□□□□□ -1.06
COL9A1P20849 AP002812.4-201ENST00000532139 286 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 MAL2-203ENST00000534619 578 ntTSL 4 BASIC8.42□□□□□ -1.06
COL9A1P20849 AC025260.1-201ENST00000548858 430 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 AC092868.1-201ENST00000557949 802 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
COL9A1P20849 SKA2-203ENST00000578105 689 ntTSL 2 BASIC8.42□□□□□ -1.06
COL9A1P20849 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 IGKV2OR2-7-201ENST00000604652 304 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 AL031281.2-201ENST00000606754 748 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC8.42□□□□□ -1.06
COL9A1P20849 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
COL9A1P20849 AC131159.2-201ENST00000613236 702 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 OR1N1-202ENST00000619659 939 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 AC022418.1-201ENST00000624118 445 ntBASIC8.42□□□□□ -1.06
COL9A1P20849 PTK2B-201ENST00000346049 4147 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL9A1P20849 CASC19-221ENST00000641309 1382 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms