Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LIG1P18858 RNU4-72P-201ENST00000410754 173 ntBASIC7.73□□□□□ -1.17
LIG1P18858 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.73□□□□□ -1.17
LIG1P18858 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.73□□□□□ -1.17
LIG1P18858 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.73□□□□□ -1.17
LIG1P18858 MTCO1P45-201ENST00000431457 267 ntBASIC7.73□□□□□ -1.17
LIG1P18858 AL451136.1-201ENST00000435399 325 ntBASIC7.73□□□□□ -1.17
LIG1P18858 AL008629.1-201ENST00000438615 184 ntBASIC7.73□□□□□ -1.17
LIG1P18858 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.73□□□□□ -1.17
LIG1P18858 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LIG1P18858 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC7.73□□□□□ -1.17
LIG1P18858 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC7.73□□□□□ -1.17
LIG1P18858 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LIG1P18858 RN7SL868P-201ENST00000485915 303 ntBASIC7.73□□□□□ -1.17
LIG1P18858 RN7SL187P-201ENST00000495587 303 ntBASIC7.73□□□□□ -1.17
LIG1P18858 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
LIG1P18858 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC7.73□□□□□ -1.17
LIG1P18858 GAPDHP71-201ENST00000511530 1003 ntBASIC7.73□□□□□ -1.17
LIG1P18858 AC093752.1-206ENST00000511823 336 ntBASIC7.73□□□□□ -1.17
LIG1P18858 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.73□□□□□ -1.17
LIG1P18858 AC093755.1-201ENST00000512950 1023 ntBASIC7.73□□□□□ -1.17
LIG1P18858 SCARNA11.1-201ENST00000516918 132 ntBASIC7.73□□□□□ -1.17
LIG1P18858 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LIG1P18858 BUD31P1-201ENST00000521828 359 ntBASIC7.73□□□□□ -1.17
LIG1P18858 AP003461.1-201ENST00000528866 78 ntBASIC7.73□□□□□ -1.17
LIG1P18858 SETP17-201ENST00000534163 817 ntBASIC7.73□□□□□ -1.17
LIG1P18858 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.73□□□□□ -1.17
LIG1P18858 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC7.73□□□□□ -1.17
LIG1P18858 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC7.73□□□□□ -1.17
LIG1P18858 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC7.73□□□□□ -1.17
LIG1P18858 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC7.73□□□□□ -1.17
LIG1P18858 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.73□□□□□ -1.17
LIG1P18858 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.73□□□□□ -1.17
LIG1P18858 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC7.73□□□□□ -1.17
LIG1P18858 AC011447.2-201ENST00000592921 283 ntBASIC7.73□□□□□ -1.17
LIG1P18858 AC005034.4-201ENST00000603612 899 ntBASIC7.73□□□□□ -1.17
LIG1P18858 AL683813.2-201ENST00000605245 502 ntBASIC7.73□□□□□ -1.17
LIG1P18858 AC105129.3-201ENST00000605455 485 ntBASIC7.73□□□□□ -1.17
LIG1P18858 AC104073.3-201ENST00000610942 955 ntBASIC7.73□□□□□ -1.17
LIG1P18858 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC7.73□□□□□ -1.17
LIG1P18858 AL359715.5-201ENST00000623431 443 ntBASIC7.73□□□□□ -1.17
LIG1P18858 AC005753.1-201ENST00000623837 618 ntBASIC7.73□□□□□ -1.17
LIG1P18858 AC006453.3-201ENST00000635891 377 ntBASIC7.73□□□□□ -1.17
LIG1P18858 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
LIG1P18858 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.73□□□□□ -1.17
LIG1P18858 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC7.73□□□□□ -1.17
LIG1P18858 AC126474.2-201ENST00000623268 1750 ntBASIC7.73□□□□□ -1.17
LIG1P18858 Z97989.1-201ENST00000531702 2421 ntBASIC7.73□□□□□ -1.17
LIG1P18858 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.73□□□□□ -1.17
LIG1P18858 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.73□□□□□ -1.17
LIG1P18858 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LIG1P18858 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LIG1P18858 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
LIG1P18858 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LIG1P18858 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LIG1P18858 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
LIG1P18858 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.72□□□□□ -1.17
LIG1P18858 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
LIG1P18858 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LIG1P18858 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LIG1P18858 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.72□□□□□ -1.17
LIG1P18858 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LIG1P18858 AL512329.1-201ENST00000404600 1592 ntBASIC7.72□□□□□ -1.17
LIG1P18858 ATP5BP1-201ENST00000411980 1574 ntBASIC7.72□□□□□ -1.17
LIG1P18858 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LIG1P18858 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
LIG1P18858 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LIG1P18858 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LIG1P18858 SNORA70.3-201ENST00000365075 132 ntBASIC7.72□□□□□ -1.17
LIG1P18858 AL359715.1-201ENST00000404330 555 ntBASIC7.72□□□□□ -1.17
LIG1P18858 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
LIG1P18858 RANP4-201ENST00000413361 655 ntBASIC7.72□□□□□ -1.17
LIG1P18858 MTND4LP17-201ENST00000414607 293 ntBASIC7.72□□□□□ -1.17
LIG1P18858 AL360013.1-201ENST00000419031 858 ntBASIC7.72□□□□□ -1.17
LIG1P18858 YWHAZP5-201ENST00000419975 730 ntBASIC7.72□□□□□ -1.17
LIG1P18858 AL513175.2-201ENST00000422071 443 ntBASIC7.72□□□□□ -1.17
LIG1P18858 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
LIG1P18858 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC7.72□□□□□ -1.17
LIG1P18858 RPL6P5-201ENST00000445678 828 ntBASIC7.72□□□□□ -1.17
LIG1P18858 AC009244.1-201ENST00000450566 258 ntBASIC7.72□□□□□ -1.17
LIG1P18858 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.72□□□□□ -1.17
LIG1P18858 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC7.72□□□□□ -1.17
LIG1P18858 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC7.72□□□□□ -1.17
LIG1P18858 RN7SL382P-201ENST00000482631 282 ntBASIC7.72□□□□□ -1.17
LIG1P18858 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC7.72□□□□□ -1.17
LIG1P18858 RPF2P2-201ENST00000504693 896 ntBASIC7.72□□□□□ -1.17
LIG1P18858 SNORA58-201ENST00000505219 137 ntBASIC7.72□□□□□ -1.17
LIG1P18858 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC7.72□□□□□ -1.17
LIG1P18858 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LIG1P18858 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC7.72□□□□□ -1.17
LIG1P18858 RNU6-1129P-201ENST00000515964 104 ntBASIC7.72□□□□□ -1.17
LIG1P18858 NRON-201ENST00000517270 370 ntBASIC7.72□□□□□ -1.17
LIG1P18858 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC7.72□□□□□ -1.17
LIG1P18858 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.72□□□□□ -1.17
LIG1P18858 AC025918.2-201ENST00000558683 763 ntBASIC7.72□□□□□ -1.17
LIG1P18858 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.72□□□□□ -1.17
LIG1P18858 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.72□□□□□ -1.17
LIG1P18858 VN1R81P-201ENST00000602085 372 ntBASIC7.72□□□□□ -1.17
LIG1P18858 AL035411.2-201ENST00000604022 421 ntBASIC7.72□□□□□ -1.17
LIG1P18858 MIR6774-201ENST00000614651 70 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms