| MUC1 | P15941 | AC010503.3-201 | ENST00000594355 | 540 nt | BASIC | 5.07 | □□□□□ -1.6 | | |
| MUC1 | P15941 | COX6CP7-201 | ENST00000597056 | 208 nt | BASIC | 5.07 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC243967.1-201 | ENST00000598976 | 578 nt | APPRIS P1 TSL 5 BASIC | 5.07 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC073333.2-201 | ENST00000603589 | 769 nt | BASIC | 5.07 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC245014.3-201 | ENST00000618589 | 347 nt | BASIC | 5.07 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC069542.2-201 | ENST00000624816 | 216 nt | BASIC | 5.07 | □□□□□ -1.6 | | |
| MUC1 | P15941 | MVP-219 | ENST00000629059 | 120 nt | TSL 5 BASIC | 5.07 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC099654.11-201 | ENST00000638857 | 294 nt | BASIC | 5.07 | □□□□□ -1.6 | | |
| MUC1 | P15941 | DGKB-201 | ENST00000399322 | 6684 nt | APPRIS P2 TSL 5 BASIC | 5.07 | □□□□□ -1.6 | | |
| MUC1 | P15941 | PLEKHA5-202 | ENST00000424268 | 4391 nt | TSL 2 BASIC | 5.07 | □□□□□ -1.6 | | |
| MUC1 | P15941 | GABRG2-224 | ENST00000640574 | 3150 nt | TSL 5 BASIC | 5.07 | □□□□□ -1.6 | | |
| MUC1 | P15941 | MUC12-206 | ENST00000536621 | 16321 nt | APPRIS P2 TSL 5 BASIC | 5.07 | □□□□□ -1.6 | | |
| MUC1 | P15941 | CHRDL1-202 | ENST00000372045 | 3860 nt | TSL 1 (best) BASIC | 5.07 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC099506.1-201 | ENST00000567359 | 4037 nt | TSL 1 (best) BASIC | 5.07 | □□□□□ -1.6 | | |
| MUC1 | P15941 | DNM3OS-201 | ENST00000417354 | 4358 nt | TSL 4 BASIC | 5.07 | □□□□□ -1.6 | | |
| MUC1 | P15941 | YPEL5-204 | ENST00000402003 | 2197 nt | APPRIS P1 TSL 2 BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | LEPR-208 | ENST00000616738 | 5081 nt | TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | RBPJP7-201 | ENST00000442803 | 1447 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | RBPJP5-201 | ENST00000449433 | 1447 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC114774.1-201 | ENST00000507410 | 1770 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | THAP12P9-201 | ENST00000503971 | 2360 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | IPCEF1-202 | ENST00000367220 | 1658 nt | APPRIS ALT2 TSL 2 BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | ZEB2-241 | ENST00000637304 | 9158 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | REP15-201 | ENST00000310791 | 1078 nt | APPRIS P1 BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | OR10R3P-201 | ENST00000361688 | 942 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | KRTAP3-1-201 | ENST00000391588 | 594 nt | APPRIS P1 BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | VN1R12P-201 | ENST00000403778 | 876 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AL158827.1-201 | ENST00000416300 | 391 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | LINC01501-201 | ENST00000427523 | 409 nt | TSL 3 BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | RPS27AP6-201 | ENST00000427962 | 448 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC007278.2-201 | ENST00000436582 | 1200 nt | TSL 3 BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | TUBB4BP6-201 | ENST00000437576 | 479 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | ATP6V1E1P1-201 | ENST00000439215 | 681 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AL162739.1-201 | ENST00000450606 | 307 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | PFN2-209 | ENST00000481275 | 560 nt | TSL 4 BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | SH3GLB1-202 | ENST00000482504 | 1199 nt | TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC008443.2-201 | ENST00000499096 | 566 nt | TSL 2 BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | RBBP4P1-201 | ENST00000502424 | 1276 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | LSM3P4-201 | ENST00000502948 | 309 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | LINC02485-202 | ENST00000511899 | 770 nt | TSL 3 BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC138832.1-201 | ENST00000522871 | 556 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC110056.1-201 | ENST00000525759 | 911 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AP003031.2-204 | ENST00000527219 | 567 nt | TSL 4 BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | ALG9-IT1-201 | ENST00000531305 | 684 nt | TSL 3 BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | GPRC5D-AS1-203 | ENST00000536029 | 466 nt | TSL 3 BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | RPA2P1-201 | ENST00000556557 | 721 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | LINC01533-201 | ENST00000585739 | 616 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC008507.3-201 | ENST00000585753 | 472 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | Z98949.1-228 | ENST00000595093 | 798 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | TEX41-218 | ENST00000596540 | 882 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC068768.2-201 | ENST00000602352 | 343 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC091167.5-201 | ENST00000605689 | 894 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC004801.6-201 | ENST00000616571 | 978 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | Six3os1_2.1-201 | ENST00000616963 | 217 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC024884.1-201 | ENST00000620583 | 399 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | OR8A1-204 | ENST00000642111 | 1145 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC004852.2-201 | ENST00000614289 | 2218 nt | TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AF287957.1-201 | ENST00000607368 | 1595 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | CASC19-238 | ENST00000641523 | 1558 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | FILIP1-202 | ENST00000370020 | 4051 nt | TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | QRSL1P1-201 | ENST00000400977 | 1540 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AMN1-208 | ENST00000537562 | 1538 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | WDPCP-203 | ENST00000409120 | 5408 nt | TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | MAP2-205 | ENST00000392194 | 5303 nt | TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | ZNF493-202 | ENST00000355504 | 4386 nt | TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| MUC1 | P15941 | RYR3-212 | ENST00000634891 | 15591 nt | APPRIS P3 TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | RAB30-216 | ENST00000612684 | 9783 nt | APPRIS P1 TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | HSPD1P7-201 | ENST00000447985 | 1686 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | F9-201 | ENST00000218099 | 2780 nt | APPRIS P1 TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | LINC01470-202 | ENST00000506723 | 2193 nt | TSL 2 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | RALGAPA1P1-201 | ENST00000443361 | 6232 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AL353796.1-201 | ENST00000561542 | 3241 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | ZNF429-209 | ENST00000618549 | 1889 nt | TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | NXT2-201 | ENST00000218004 | 2692 nt | TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | PDS5B-201 | ENST00000315596 | 7497 nt | APPRIS P1 TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC012254.3-201 | ENST00000591183 | 2117 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | NOVA1-206 | ENST00000539517 | 3912 nt | APPRIS P4 TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | DOPEY1-201 | ENST00000237163 | 7995 nt | APPRIS ALT1 TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | OR8U1-201 | ENST00000302270 | 930 nt | APPRIS P1 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | PPP1R7-203 | ENST00000401987 | 820 nt | TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | RNA5SP431-201 | ENST00000410312 | 120 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | NMD3P2-201 | ENST00000421815 | 761 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | FRMPD4-AS1-201 | ENST00000425057 | 285 nt | TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC069154.1-201 | ENST00000432914 | 542 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC211433.1-202 | ENST00000434256 | 1187 nt | TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC073410.1-201 | ENST00000435125 | 589 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC099670.2-201 | ENST00000435130 | 321 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | MTND2P40-201 | ENST00000436718 | 841 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC092162.2-201 | ENST00000438143 | 532 nt | TSL 4 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | LINC01350-202 | ENST00000439633 | 623 nt | TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | CUBNP2-201 | ENST00000443534 | 1139 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AL445466.1-201 | ENST00000448432 | 357 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC005077.1-201 | ENST00000449226 | 375 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | PPIAP27-201 | ENST00000453800 | 265 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC112495.1-201 | ENST00000456037 | 756 nt | TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC023194.2-201 | ENST00000465398 | 406 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | AC023245.1-201 | ENST00000468501 | 517 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | ARPP21-231 | ENST00000474696 | 572 nt | TSL 2 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | SLC9A9-AS1-201 | ENST00000479030 | 518 nt | TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC1 | P15941 | RN7SL170P-201 | ENST00000487098 | 295 nt | BASIC | 5.05 | □□□□□ -1.6 | | |