Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC010975.3-201ENST00000618727 978 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 AC106782.7-201ENST00000624024 418 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 AC133555.5-201ENST00000624430 418 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.6□□□□□ -1.35
COL6A2P12110 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL6A2P12110 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL6A2P12110 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.6□□□□□ -1.35
COL6A2P12110 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.6□□□□□ -1.35
COL6A2P12110 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL6A2P12110 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL6A2P12110 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.6□□□□□ -1.35
COL6A2P12110 AC130360.2-201ENST00000533477 1556 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 ZNF849P-201ENST00000594711 1566 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
COL6A2P12110 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.6□□□□□ -1.35
COL6A2P12110 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL6A2P12110 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.59□□□□□ -1.35
COL6A2P12110 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
COL6A2P12110 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL6A2P12110 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.59□□□□□ -1.35
COL6A2P12110 DDX43P2-201ENST00000604753 1354 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL6A2P12110 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL6A2P12110 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL6A2P12110 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
COL6A2P12110 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL6A2P12110 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
COL6A2P12110 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL6A2P12110 AC010132.2-201ENST00000295493 1043 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
COL6A2P12110 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL6A2P12110 BMS1P3-201ENST00000372011 932 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL6A2P12110 U6.112-201ENST00000384129 70 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 SNORD116-12-201ENST00000384468 92 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 AP003170.5-201ENST00000397185 335 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 OR2W4P-201ENST00000406496 926 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC6.59□□□□□ -1.35
COL6A2P12110 RPL12P10-201ENST00000413498 498 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.59□□□□□ -1.35
COL6A2P12110 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL6A2P12110 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
COL6A2P12110 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.59□□□□□ -1.35
COL6A2P12110 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.59□□□□□ -1.35
COL6A2P12110 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.59□□□□□ -1.35
COL6A2P12110 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.59□□□□□ -1.35
COL6A2P12110 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.59□□□□□ -1.35
COL6A2P12110 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.59□□□□□ -1.35
COL6A2P12110 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC6.59□□□□□ -1.35
COL6A2P12110 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.59□□□□□ -1.35
COL6A2P12110 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.59□□□□□ -1.35
COL6A2P12110 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.59□□□□□ -1.35
COL6A2P12110 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.59□□□□□ -1.35
COL6A2P12110 RPS27AP16-201ENST00000492222 470 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC6.59□□□□□ -1.35
COL6A2P12110 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.59□□□□□ -1.35
COL6A2P12110 AC092593.2-201ENST00000513866 913 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.59□□□□□ -1.35
COL6A2P12110 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC6.59□□□□□ -1.35
COL6A2P12110 AP000926.4-201ENST00000527351 454 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL6A2P12110 PHBP2-201ENST00000532859 806 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC6.59□□□□□ -1.35
COL6A2P12110 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.59□□□□□ -1.35
COL6A2P12110 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.59□□□□□ -1.35
COL6A2P12110 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.59□□□□□ -1.35
COL6A2P12110 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.59□□□□□ -1.35
COL6A2P12110 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.59□□□□□ -1.35
COL6A2P12110 MTND4LP24-201ENST00000572277 291 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 RBM22P1-201ENST00000578589 1214 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.59□□□□□ -1.35
COL6A2P12110 FCGR1CP-201ENST00000579737 1127 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.59□□□□□ -1.35
COL6A2P12110 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.59□□□□□ -1.35
COL6A2P12110 EXOSC3P2-201ENST00000594464 497 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.59□□□□□ -1.35
COL6A2P12110 SUMO2P14-201ENST00000604488 293 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 AC090425.2-201ENST00000608818 501 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
COL6A2P12110 LINC02211-204ENST00000642024 1070 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL6A2P12110 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL6A2P12110 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL6A2P12110 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL6A2P12110 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL6A2P12110 OR2A3P-202ENST00000641249 1776 ntBASIC6.59□□□□□ -1.35
COL6A2P12110 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.59□□□□□ -1.36
COL6A2P12110 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.59□□□□□ -1.36
COL6A2P12110 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
COL6A2P12110 AP000432.2-201ENST00000624164 2048 ntBASIC6.59□□□□□ -1.36
COL6A2P12110 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
COL6A2P12110 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.36
COL6A2P12110 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
COL6A2P12110 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
COL6A2P12110 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL6A2P12110 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL6A2P12110 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL6A2P12110 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.58□□□□□ -1.36
COL6A2P12110 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms