Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.39□□□□□ -1.39
RB1P06400 RPL23AP60-201ENST00000450011 454 ntBASIC6.39□□□□□ -1.39
RB1P06400 TRBV8-1-201ENST00000481590 279 ntBASIC6.39□□□□□ -1.39
RB1P06400 AC099521.1-201ENST00000482557 334 ntBASIC6.39□□□□□ -1.39
RB1P06400 RPL32P9-201ENST00000487963 407 ntBASIC6.39□□□□□ -1.39
RB1P06400 RPS23P1-201ENST00000491662 432 ntBASIC6.39□□□□□ -1.39
RB1P06400 AC231760.1-201ENST00000498002 260 ntBASIC6.39□□□□□ -1.39
RB1P06400 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.39□□□□□ -1.39
RB1P06400 RNU6-1334P-201ENST00000516032 105 ntBASIC6.39□□□□□ -1.39
RB1P06400 SNORA43.3-201ENST00000517240 103 ntBASIC6.39□□□□□ -1.39
RB1P06400 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.39□□□□□ -1.39
RB1P06400 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.39□□□□□ -1.39
RB1P06400 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.39□□□□□ -1.39
RB1P06400 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
RB1P06400 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.39□□□□□ -1.39
RB1P06400 AC024255.1-201ENST00000614376 102 ntBASIC6.39□□□□□ -1.39
RB1P06400 AC037198.3-201ENST00000616754 526 ntBASIC6.39□□□□□ -1.39
RB1P06400 AL353684.1-201ENST00000622677 1120 ntBASIC6.39□□□□□ -1.39
RB1P06400 AC009120.7-201ENST00000623452 780 ntBASIC6.39□□□□□ -1.39
RB1P06400 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC6.39□□□□□ -1.39
RB1P06400 AC004808.2-201ENST00000627965 773 ntBASIC6.39□□□□□ -1.39
RB1P06400 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.39□□□□□ -1.39
RB1P06400 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
RB1P06400 AC087565.3-203ENST00000641018 837 ntBASIC6.39□□□□□ -1.39
RB1P06400 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.39□□□□□ -1.39
RB1P06400 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.39□□□□□ -1.39
RB1P06400 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
RB1P06400 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
RB1P06400 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.39□□□□□ -1.39
RB1P06400 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RB1P06400 SNX18P3-202ENST00000565670 1750 ntBASIC6.39□□□□□ -1.39
RB1P06400 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RB1P06400 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RB1P06400 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
RB1P06400 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RB1P06400 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.38□□□□□ -1.39
RB1P06400 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.38□□□□□ -1.39
RB1P06400 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.38□□□□□ -1.39
RB1P06400 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.38□□□□□ -1.39
RB1P06400 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RB1P06400 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RB1P06400 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RB1P06400 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RB1P06400 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.38□□□□□ -1.39
RB1P06400 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RB1P06400 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
RB1P06400 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.38□□□□□ -1.39
RB1P06400 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.38□□□□□ -1.39
RB1P06400 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.38□□□□□ -1.39
RB1P06400 AL596448.1-201ENST00000415024 392 ntBASIC6.38□□□□□ -1.39
RB1P06400 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.38□□□□□ -1.39
RB1P06400 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.38□□□□□ -1.39
RB1P06400 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.38□□□□□ -1.39
RB1P06400 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.38□□□□□ -1.39
RB1P06400 RPS27P18-201ENST00000431701 247 ntBASIC6.38□□□□□ -1.39
RB1P06400 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RB1P06400 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.38□□□□□ -1.39
RB1P06400 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.38□□□□□ -1.39
RB1P06400 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.38□□□□□ -1.39
RB1P06400 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.38□□□□□ -1.39
RB1P06400 AC027026.1-201ENST00000532323 742 ntBASIC6.38□□□□□ -1.39
RB1P06400 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RB1P06400 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.38□□□□□ -1.39
RB1P06400 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.38□□□□□ -1.39
RB1P06400 AL049872.1-201ENST00000556323 322 ntBASIC6.38□□□□□ -1.39
RB1P06400 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.38□□□□□ -1.39
RB1P06400 AC044860.2-201ENST00000561005 179 ntBASIC6.38□□□□□ -1.39
RB1P06400 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.38□□□□□ -1.39
RB1P06400 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.38□□□□□ -1.39
RB1P06400 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.38□□□□□ -1.39
RB1P06400 MIR1269B-201ENST00000580405 75 ntBASIC6.38□□□□□ -1.39
RB1P06400 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.38□□□□□ -1.39
RB1P06400 AC004948.1-201ENST00000609858 672 ntBASIC6.38□□□□□ -1.39
RB1P06400 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.38□□□□□ -1.39
RB1P06400 AC239803.2-201ENST00000610161 430 ntBASIC6.38□□□□□ -1.39
RB1P06400 AL445649.1-201ENST00000615941 691 ntBASIC6.38□□□□□ -1.39
RB1P06400 AC117409.1-201ENST00000470499 1310 ntBASIC6.38□□□□□ -1.39
RB1P06400 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.38□□□□□ -1.39
RB1P06400 AL391261.1-201ENST00000555712 1479 ntBASIC6.38□□□□□ -1.39
RB1P06400 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.38□□□□□ -1.39
RB1P06400 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.38□□□□□ -1.39
RB1P06400 AL353763.1-201ENST00000624467 1628 ntBASIC6.38□□□□□ -1.39
RB1P06400 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RB1P06400 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.38□□□□□ -1.39
RB1P06400 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RB1P06400 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RB1P06400 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.38□□□□□ -1.39
RB1P06400 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.38□□□□□ -1.39
RB1P06400 PARP4P2-201ENST00000446672 3326 ntBASIC6.38□□□□□ -1.39
RB1P06400 AC007114.2-201ENST00000576014 4281 ntBASIC6.38□□□□□ -1.39
RB1P06400 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RB1P06400 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
RB1P06400 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RB1P06400 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
RB1P06400 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RB1P06400 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.37□□□□□ -1.39
RB1P06400 AC062029.1-202ENST00000606164 3651 ntBASIC6.37□□□□□ -1.39
RB1P06400 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.37□□□□□ -1.39
RB1P06400 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RB1P06400 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms