Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.28□□□□□ -1.4
TIMP1P01033 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TIMP1P01033 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TIMP1P01033 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
TIMP1P01033 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TIMP1P01033 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
TIMP1P01033 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TIMP1P01033 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.28□□□□□ -1.4
TIMP1P01033 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TIMP1P01033 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
TIMP1P01033 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TIMP1P01033 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TIMP1P01033 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.28□□□□□ -1.4
TIMP1P01033 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TIMP1P01033 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TIMP1P01033 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TIMP1P01033 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TIMP1P01033 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.27□□□□□ -1.4
TIMP1P01033 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TIMP1P01033 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TIMP1P01033 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
TIMP1P01033 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TIMP1P01033 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TIMP1P01033 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TIMP1P01033 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TIMP1P01033 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TIMP1P01033 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TIMP1P01033 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TIMP1P01033 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TIMP1P01033 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TIMP1P01033 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
TIMP1P01033 MIR640-201ENST00000385086 96 ntBASIC6.27□□□□□ -1.41
TIMP1P01033 AL390774.1-201ENST00000411924 246 ntBASIC6.27□□□□□ -1.41
TIMP1P01033 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.27□□□□□ -1.41
TIMP1P01033 AC074255.1-201ENST00000511259 501 ntBASIC6.27□□□□□ -1.41
TIMP1P01033 AP000676.2-201ENST00000529711 301 ntBASIC6.27□□□□□ -1.41
TIMP1P01033 AC126177.5-201ENST00000549599 178 ntBASIC6.27□□□□□ -1.41
TIMP1P01033 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.27□□□□□ -1.41
TIMP1P01033 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.27□□□□□ -1.41
TIMP1P01033 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.27□□□□□ -1.41
TIMP1P01033 AC126915.2-201ENST00000610957 190 ntBASIC6.27□□□□□ -1.41
TIMP1P01033 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TIMP1P01033 ZNF733P-202ENST00000444809 1573 ntBASIC6.27□□□□□ -1.41
TIMP1P01033 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
TIMP1P01033 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TIMP1P01033 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
TIMP1P01033 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.26□□□□□ -1.41
TIMP1P01033 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.26□□□□□ -1.41
TIMP1P01033 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TIMP1P01033 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TIMP1P01033 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TIMP1P01033 IMMTP1-201ENST00000435590 2219 ntBASIC6.26□□□□□ -1.41
TIMP1P01033 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.26□□□□□ -1.41
TIMP1P01033 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.26□□□□□ -1.41
TIMP1P01033 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TIMP1P01033 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
TIMP1P01033 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TIMP1P01033 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
TIMP1P01033 AL021877.2-201ENST00000624442 10684 ntBASIC6.26□□□□□ -1.41
TIMP1P01033 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TIMP1P01033 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
TIMP1P01033 RN7SKP103-201ENST00000363848 320 ntBASIC6.26□□□□□ -1.41
TIMP1P01033 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TIMP1P01033 OR5W1P-201ENST00000423705 938 ntBASIC6.26□□□□□ -1.41
TIMP1P01033 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TIMP1P01033 CBX1P2-201ENST00000453841 458 ntBASIC6.26□□□□□ -1.41
TIMP1P01033 AC090142.2-201ENST00000483263 416 ntBASIC6.26□□□□□ -1.41
TIMP1P01033 AC073610.1-201ENST00000489971 396 ntBASIC6.26□□□□□ -1.41
TIMP1P01033 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.26□□□□□ -1.41
TIMP1P01033 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.26□□□□□ -1.41
TIMP1P01033 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.26□□□□□ -1.41
TIMP1P01033 MIR4436B2-201ENST00000581415 91 ntBASIC6.26□□□□□ -1.41
TIMP1P01033 MIR4436B1-201ENST00000583272 91 ntBASIC6.26□□□□□ -1.41
TIMP1P01033 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.26□□□□□ -1.41
TIMP1P01033 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TIMP1P01033 AC010329.1-201ENST00000593903 8328 ntBASIC6.26□□□□□ -1.41
TIMP1P01033 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
TIMP1P01033 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TIMP1P01033 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.26□□□□□ -1.41
TIMP1P01033 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.26□□□□□ -1.41
TIMP1P01033 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TIMP1P01033 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.26□□□□□ -1.41
TIMP1P01033 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TIMP1P01033 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.26□□□□□ -1.41
TIMP1P01033 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TIMP1P01033 SALL4P7-201ENST00000555779 3120 ntBASIC6.25□□□□□ -1.41
TIMP1P01033 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
TIMP1P01033 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TIMP1P01033 AC112255.1-201ENST00000624070 2493 ntBASIC6.25□□□□□ -1.41
TIMP1P01033 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
TIMP1P01033 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TIMP1P01033 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
TIMP1P01033 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TIMP1P01033 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TIMP1P01033 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.25□□□□□ -1.41
TIMP1P01033 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TIMP1P01033 RNA5SP305-201ENST00000362665 119 ntBASIC6.25□□□□□ -1.41
TIMP1P01033 NIFKP3-201ENST00000417799 865 ntBASIC6.25□□□□□ -1.41
TIMP1P01033 NENFP1-201ENST00000419476 466 ntBASIC6.25□□□□□ -1.41
TIMP1P01033 AL133325.1-201ENST00000421090 382 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms